RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PRR36Q9H6K5 1346 aa21.88■■□□□ 1.09
BRCA2-204ENST00000530893 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
BRCA2-204ENST00000530893 HMOX1P09601 288 aa21.87■■□□□ 1.09
BRCA2-204ENST00000530893 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.87■■□□□ 1.09
BRCA2-204ENST00000530893 LAS1LQ9Y4W2 734 aaKnown RBP21.87■■□□□ 1.09
BRCA2-204ENST00000530893 PLEKHG3A1L390 1219 aa21.86■■□□□ 1.09
BRCA2-204ENST00000530893 ARHGAP45Q92619 1136 aa21.86■■□□□ 1.09
BRCA2-204ENST00000530893 CHMP4BQ9H444 224 aaKnown RBP21.86■■□□□ 1.09
BRCA2-204ENST00000530893 USP19O94966 1318 aa21.86■■□□□ 1.09
BRCA2-204ENST00000530893 ZBTB40Q9NUA8 1239 aa21.85■■□□□ 1.09
BRCA2-204ENST00000530893 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
BRCA2-204ENST00000530893 ZRANB1Q9UGI0 708 aa21.85■■□□□ 1.09
BRCA2-204ENST00000530893 TMEM57Q8N5G2 664 aa21.84■■□□□ 1.09
BRCA2-204ENST00000530893 NCKAP5LQ9HCH0 1330 aa21.84■■□□□ 1.09
BRCA2-204ENST00000530893 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
BRCA2-204ENST00000530893 SLIT1O75093 1534 aa21.84■■□□□ 1.09
BRCA2-204ENST00000530893 UPF2Q9HAU5 1272 aaKnown RBP21.84■■□□□ 1.09
BRCA2-204ENST00000530893 SMC5Q8IY18 1101 aa21.83■■□□□ 1.09
BRCA2-204ENST00000530893 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 VAMP4O75379 141 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 LTKP29376 864 aa21.82■■□□□ 1.08
BRCA2-204ENST00000530893 RRS1Q15050 365 aaKnown RBP21.82■■□□□ 1.08
BRCA2-204ENST00000530893 ARHGAP23Q9P227 1491 aa21.81■■□□□ 1.08
BRCA2-204ENST00000530893 USP6P35125 1406 aa21.81■■□□□ 1.08
BRCA2-204ENST00000530893 PTCH1Q13635 1447 aa21.81■■□□□ 1.08
BRCA2-204ENST00000530893 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
BRCA2-204ENST00000530893 ACEP12821 1306 aa21.8■■□□□ 1.08
BRCA2-204ENST00000530893 SEC24BO95487 1268 aa21.79■■□□□ 1.08
BRCA2-204ENST00000530893 MRPL50Q8N5N7 158 aaKnown RBP21.79■■□□□ 1.08
BRCA2-204ENST00000530893 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
BRCA2-204ENST00000530893 BECN1Q14457 450 aa21.78■■□□□ 1.08
BRCA2-204ENST00000530893 MBIPQ9NS73 344 aa21.78■■□□□ 1.08
BRCA2-204ENST00000530893 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
BRCA2-204ENST00000530893 SLC4A3P48751 1232 aa21.77■■□□□ 1.08
BRCA2-204ENST00000530893 TBX22Q9Y458 520 aa21.77■■□□□ 1.08
BRCA2-204ENST00000530893 PTPRUQ92729 1446 aa21.77■■□□□ 1.08
BRCA2-204ENST00000530893 SSH2Q76I76 1423 aa21.76■■□□□ 1.07
BRCA2-204ENST00000530893 HAP1P54257 671 aaPredicted RBP21.76■■□□□ 1.07
BRCA2-204ENST00000530893 TBC1D32Q96NH3 1257 aa21.75■■□□□ 1.07
BRCA2-204ENST00000530893 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
BRCA2-204ENST00000530893 TTC21AQ8NDW8 1320 aa21.75■■□□□ 1.07
BRCA2-204ENST00000530893 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
BRCA2-204ENST00000530893 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
BRCA2-204ENST00000530893 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
BRCA2-204ENST00000530893 ABCC4O15439 1325 aa21.73■■□□□ 1.07
BRCA2-204ENST00000530893 ZBTB7BO15156 539 aaPredicted RBP21.73■■□□□ 1.07
BRCA2-204ENST00000530893 TSPYL6Q8N831 410 aa21.73■■□□□ 1.07
BRCA2-204ENST00000530893 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
BRCA2-204ENST00000530893 KIF24Q5T7B8 1368 aa21.72■■□□□ 1.07
BRCA2-204ENST00000530893 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
BRCA2-204ENST00000530893 NUCB1Q02818 461 aa21.72■■□□□ 1.07
BRCA2-204ENST00000530893 NFKBIBQ15653 356 aa21.72■■□□□ 1.07
BRCA2-204ENST00000530893 API5Q9BZZ5 524 aaKnown RBP21.72■■□□□ 1.07
BRCA2-204ENST00000530893 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
BRCA2-204ENST00000530893 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
BRCA2-204ENST00000530893 PEAK1Q9H792 1746 aa21.71■■□□□ 1.07
BRCA2-204ENST00000530893 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
BRCA2-204ENST00000530893 GCC1Q96CN9 775 aa21.7■■□□□ 1.06
BRCA2-204ENST00000530893 CEBPAP49715 358 aaPredicted RBP21.7■■□□□ 1.06
BRCA2-204ENST00000530893 SULT6B1Q6IMI4 303 aa21.7■■□□□ 1.06
BRCA2-204ENST00000530893 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
BRCA2-204ENST00000530893 ARHGEF10O15013 1369 aa21.68■■□□□ 1.06
BRCA2-204ENST00000530893 FMN2Q9NZ56 1722 aa21.68■■□□□ 1.06
BRCA2-204ENST00000530893 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
BRCA2-204ENST00000530893 KIAA0232Q92628 1395 aa21.67■■□□□ 1.06
BRCA2-204ENST00000530893 FAM83GA6ND36 823 aa21.67■■□□□ 1.06
BRCA2-204ENST00000530893 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
BRCA2-204ENST00000530893 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
BRCA2-204ENST00000530893 ANKARQ7Z5J8 1434 aa21.66■■□□□ 1.06
BRCA2-204ENST00000530893 CHL1O00533 1208 aa21.65■■□□□ 1.06
BRCA2-204ENST00000530893 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
BRCA2-204ENST00000530893 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
BRCA2-204ENST00000530893 FLT4P35916 1363 aa21.64■■□□□ 1.06
BRCA2-204ENST00000530893 NUTM2FA1L443 756 aa21.64■■□□□ 1.05
BRCA2-204ENST00000530893 HSP90AB2PQ58FF8 381 aa21.64■■□□□ 1.05
BRCA2-204ENST00000530893 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
BRCA2-204ENST00000530893 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
BRCA2-204ENST00000530893 KDRP35968 1356 aa21.62■■□□□ 1.05
BRCA2-204ENST00000530893 C22orf23Q9BZE7 217 aa21.62■■□□□ 1.05
BRCA2-204ENST00000530893 MAP3K19Q56UN5 1328 aa21.61■■□□□ 1.05
BRCA2-204ENST00000530893 RGPD8O14715 1765 aaPredicted RBP21.61■■□□□ 1.05
BRCA2-204ENST00000530893 BMP2KLQ5H9B9 411 aa21.61■■□□□ 1.05
BRCA2-204ENST00000530893 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
BRCA2-204ENST00000530893 USP54Q70EL1 1684 aa21.6■■□□□ 1.05
BRCA2-204ENST00000530893 INTS3Q68E01 1043 aaKnown RBP21.6■■□□□ 1.05
BRCA2-204ENST00000530893 LNPKQ9C0E8 428 aa21.6■■□□□ 1.05
BRCA2-204ENST00000530893 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
BRCA2-204ENST00000530893 CRB1P82279 1406 aa21.59■■□□□ 1.05
BRCA2-204ENST00000530893 PTPRCP08575 1304 aa21.59■■□□□ 1.05
BRCA2-204ENST00000530893 TBC1D2Q9BYX2 928 aa21.57■■□□□ 1.04
BRCA2-204ENST00000530893 MFAP1P55081 439 aaKnown RBP21.56■■□□□ 1.04
BRCA2-204ENST00000530893 GSE1Q14687 1217 aa21.56■■□□□ 1.04
BRCA2-204ENST00000530893 ANKRD45Q5TZF3 282 aa21.56■■□□□ 1.04
BRCA2-204ENST00000530893 IGSF1Q8N6C5 1336 aa21.56■■□□□ 1.04
BRCA2-204ENST00000530893 MCM10Q7L590 875 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms