RNA–Protein interactions for RNA: ENST00000530656.5

PRDM11-204, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRDM11, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-204ENST00000530656 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
PRDM11-204ENST00000530656 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
PRDM11-204ENST00000530656 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
PRDM11-204ENST00000530656 PSME1Q06323 249 aa17.06■□□□□ 0.32
PRDM11-204ENST00000530656 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
PRDM11-204ENST00000530656 MAP3K19Q56UN5 1328 aa17.06■□□□□ 0.32
PRDM11-204ENST00000530656 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
PRDM11-204ENST00000530656 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
PRDM11-204ENST00000530656 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
PRDM11-204ENST00000530656 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
PRDM11-204ENST00000530656 TRIM35Q9UPQ4 493 aa17.06■□□□□ 0.32
PRDM11-204ENST00000530656 HMOX1P09601 288 aa17.05■□□□□ 0.32
PRDM11-204ENST00000530656 AMPHP49418 695 aa17.05■□□□□ 0.32
PRDM11-204ENST00000530656 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
PRDM11-204ENST00000530656 ATF3P18847 181 aa17.04■□□□□ 0.32
PRDM11-204ENST00000530656 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
PRDM11-204ENST00000530656 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
PRDM11-204ENST00000530656 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
PRDM11-204ENST00000530656 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.31
PRDM11-204ENST00000530656 SOX12O15370 315 aa17.01■□□□□ 0.31
PRDM11-204ENST00000530656 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
PRDM11-204ENST00000530656 PLIN1O60240 522 aa17.01■□□□□ 0.31
PRDM11-204ENST00000530656 CADPS2Q86UW7 1296 aa17.01■□□□□ 0.31
PRDM11-204ENST00000530656 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
PRDM11-204ENST00000530656 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
PRDM11-204ENST00000530656 MST1RQ04912 1400 aa17■□□□□ 0.31
PRDM11-204ENST00000530656 MSH6P52701 1360 aa16.99■□□□□ 0.31
PRDM11-204ENST00000530656 NFAT5O94916 1531 aa16.99■□□□□ 0.31
PRDM11-204ENST00000530656 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
PRDM11-204ENST00000530656 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
PRDM11-204ENST00000530656 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
PRDM11-204ENST00000530656 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
PRDM11-204ENST00000530656 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
PRDM11-204ENST00000530656 RARSP54136 660 aaKnown RBP16.98■□□□□ 0.31
PRDM11-204ENST00000530656 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
PRDM11-204ENST00000530656 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
PRDM11-204ENST00000530656 SLIT3O75094 1523 aa16.98■□□□□ 0.31
PRDM11-204ENST00000530656 KDRP35968 1356 aa16.98■□□□□ 0.31
PRDM11-204ENST00000530656 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
PRDM11-204ENST00000530656 HOXC9P31274 260 aa16.97■□□□□ 0.31
PRDM11-204ENST00000530656 GNAI1P63096 354 aa16.97■□□□□ 0.31
PRDM11-204ENST00000530656 IFT57Q9NWB7 429 aa16.97■□□□□ 0.31
PRDM11-204ENST00000530656 LTN1O94822 1766 aa16.97■□□□□ 0.31
PRDM11-204ENST00000530656 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
PRDM11-204ENST00000530656 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.3
PRDM11-204ENST00000530656 FOXO3O43524 673 aa16.96■□□□□ 0.3
PRDM11-204ENST00000530656 BCAR3O75815 825 aa16.96■□□□□ 0.3
PRDM11-204ENST00000530656 MS4A1P11836 297 aa16.96■□□□□ 0.3
PRDM11-204ENST00000530656 AAMPQ13685 434 aa16.95■□□□□ 0.3
PRDM11-204ENST00000530656 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
PRDM11-204ENST00000530656 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
PRDM11-204ENST00000530656 AEBP1Q8IUX7 1158 aa16.94■□□□□ 0.3
PRDM11-204ENST00000530656 IP6K1Q92551 441 aa16.94■□□□□ 0.3
PRDM11-204ENST00000530656 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
PRDM11-204ENST00000530656 USP19O94966 1318 aa16.94■□□□□ 0.3
PRDM11-204ENST00000530656 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
PRDM11-204ENST00000530656 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
PRDM11-204ENST00000530656 C20orf194Q5TEA3 1177 aa16.92■□□□□ 0.3
PRDM11-204ENST00000530656 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
PRDM11-204ENST00000530656 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
PRDM11-204ENST00000530656 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
PRDM11-204ENST00000530656 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
PRDM11-204ENST00000530656 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
PRDM11-204ENST00000530656 CFAP44Q96MT7 982 aa16.91■□□□□ 0.3
PRDM11-204ENST00000530656 EYA1Q99502 592 aa16.91■□□□□ 0.3
PRDM11-204ENST00000530656 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
PRDM11-204ENST00000530656 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
PRDM11-204ENST00000530656 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
PRDM11-204ENST00000530656 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
PRDM11-204ENST00000530656 GCP02774 474 aa16.89■□□□□ 0.29
PRDM11-204ENST00000530656 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
PRDM11-204ENST00000530656 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
PRDM11-204ENST00000530656 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
PRDM11-204ENST00000530656 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
PRDM11-204ENST00000530656 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
PRDM11-204ENST00000530656 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
PRDM11-204ENST00000530656 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
PRDM11-204ENST00000530656 XPCQ01831 940 aaPredicted RBP16.87■□□□□ 0.29
PRDM11-204ENST00000530656 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
PRDM11-204ENST00000530656 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
PRDM11-204ENST00000530656 ABCC6O95255 1503 aa16.87■□□□□ 0.29
PRDM11-204ENST00000530656 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
PRDM11-204ENST00000530656 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
PRDM11-204ENST00000530656 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
PRDM11-204ENST00000530656 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
PRDM11-204ENST00000530656 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
PRDM11-204ENST00000530656 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
PRDM11-204ENST00000530656 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
PRDM11-204ENST00000530656 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
PRDM11-204ENST00000530656 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
PRDM11-204ENST00000530656 PXDNQ92626 1479 aa16.85■□□□□ 0.29
PRDM11-204ENST00000530656 MED1Q15648 1581 aaPredicted RBP16.84■□□□□ 0.29
PRDM11-204ENST00000530656 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
PRDM11-204ENST00000530656 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
PRDM11-204ENST00000530656 KIAA0232Q92628 1395 aa16.83■□□□□ 0.28
PRDM11-204ENST00000530656 FAM83GA6ND36 823 aa16.83■□□□□ 0.28
PRDM11-204ENST00000530656 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
PRDM11-204ENST00000530656 TOM1O60784 492 aa16.83■□□□□ 0.28
PRDM11-204ENST00000530656 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
PRDM11-204ENST00000530656 LRRC37A3O60309 1634 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms