RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GPATCH3Q96I76 525 aa15.07■□□□□ 0
SCN3B-206ENST00000530277 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
SCN3B-206ENST00000530277 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
SCN3B-206ENST00000530277 SYTL4Q96C24 671 aaPredicted RBP15.06■□□□□ 0
SCN3B-206ENST00000530277 PLA2R1Q13018 1463 aa15.06■□□□□ 0
SCN3B-206ENST00000530277 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
SCN3B-206ENST00000530277 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
SCN3B-206ENST00000530277 NEUROD6Q96NK8 337 aa15.06■□□□□ 0
SCN3B-206ENST00000530277 NASPP49321 788 aaPredicted RBP15.05■□□□□ 0
SCN3B-206ENST00000530277 BCORL1Q5H9F3 1711 aa15.05■□□□□ -0
SCN3B-206ENST00000530277 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
SCN3B-206ENST00000530277 GDPD2Q9HCC8 539 aa15.05■□□□□ -0
SCN3B-206ENST00000530277 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
SCN3B-206ENST00000530277 FIBPO43427 364 aa15.05■□□□□ -0
SCN3B-206ENST00000530277 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
SCN3B-206ENST00000530277 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
SCN3B-206ENST00000530277 OTUD7AQ8TE49 926 aaPredicted RBP15.04■□□□□ -0
SCN3B-206ENST00000530277 SHANK2Q9UPX8 1470 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 ACEP12821 1306 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 TOMM22Q9NS69 142 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
SCN3B-206ENST00000530277 CT47B1P0C2W7 299 aaPredicted RBP15.04■□□□□ -0
SCN3B-206ENST00000530277 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -0
SCN3B-206ENST00000530277 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
SCN3B-206ENST00000530277 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
SCN3B-206ENST00000530277 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
SCN3B-206ENST00000530277 LRRCC1Q9C099 1032 aa15.03■□□□□ -0
SCN3B-206ENST00000530277 GNAI3P08754 354 aa15.03■□□□□ -0
SCN3B-206ENST00000530277 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
SCN3B-206ENST00000530277 POLR3AO14802 1390 aaPredicted RBP15.03■□□□□ -0
SCN3B-206ENST00000530277 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
SCN3B-206ENST00000530277 PPFIA3O75145 1194 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 STK3Q13188 491 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 RAPGEF4Q8WZA2 1011 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 FAM177BA6PVY3 158 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 MRE11P49959 708 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 IFT57Q9NWB7 429 aa15.02■□□□□ -0
SCN3B-206ENST00000530277 LRRFIP2Q9Y608 721 aaKnown RBP15.02■□□□□ -0
SCN3B-206ENST00000530277 NUCB2P80303 420 aa15.02□□□□□ -0.01
SCN3B-206ENST00000530277 KIAA2012Q0VF49 1180 aa15.02□□□□□ -0.01
SCN3B-206ENST00000530277 SKOR2Q2VWA4 1001 aaPredicted RBP15.02□□□□□ -0.01
SCN3B-206ENST00000530277 RSPH6AQ9H0K4 717 aa15.02□□□□□ -0.01
SCN3B-206ENST00000530277 VAMP4O75379 141 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
SCN3B-206ENST00000530277 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
SCN3B-206ENST00000530277 GRPEL1Q9HAV7 217 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 SMC3Q9UQE7 1217 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 KDM5CP41229 1560 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 ERC2O15083 957 aa15.01□□□□□ -0.01
SCN3B-206ENST00000530277 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
SCN3B-206ENST00000530277 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
SCN3B-206ENST00000530277 DNAJC2Q99543 621 aaKnown RBP15.01□□□□□ -0.01
SCN3B-206ENST00000530277 RABEP1Q15276 862 aa15□□□□□ -0.01
SCN3B-206ENST00000530277 SRCIN1Q9C0H9 1055 aa15□□□□□ -0.01
SCN3B-206ENST00000530277 FAM13BQ9NYF5 915 aa15□□□□□ -0.01
SCN3B-206ENST00000530277 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
SCN3B-206ENST00000530277 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
SCN3B-206ENST00000530277 WDR7Q9Y4E6 1490 aa15□□□□□ -0.01
SCN3B-206ENST00000530277 PIK3C2GO75747 1445 aa15□□□□□ -0.01
SCN3B-206ENST00000530277 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
SCN3B-206ENST00000530277 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
SCN3B-206ENST00000530277 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 FSD1Q9BTV5 496 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 ZBTB40Q9NUA8 1239 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 H3BQV1 296 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCN3B-206ENST00000530277 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
SCN3B-206ENST00000530277 UBE2Q2Q8WVN8 375 aa14.98□□□□□ -0.01
SCN3B-206ENST00000530277 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
SCN3B-206ENST00000530277 NUCB1Q02818 461 aa14.98□□□□□ -0.01
SCN3B-206ENST00000530277 G2E3Q7L622 706 aa14.98□□□□□ -0.01
SCN3B-206ENST00000530277 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
SCN3B-206ENST00000530277 PTMSP20962 102 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 SPG7Q9UQ90 795 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-206ENST00000530277 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
SCN3B-206ENST00000530277 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 CCT4P50991 539 aaKnown RBP14.97□□□□□ -0.01
SCN3B-206ENST00000530277 FLIIQ13045 1269 aa14.97□□□□□ -0.01
SCN3B-206ENST00000530277 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
SCN3B-206ENST00000530277 PTPRTO14522 1441 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 BLMP54132 1417 aaPredicted RBP14.96□□□□□ -0.01
SCN3B-206ENST00000530277 SDSP20132 328 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 STRN4Q9NRL3 753 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 RBM27Q9P2N5 1060 aaKnown RBP14.96□□□□□ -0.01
SCN3B-206ENST00000530277 R3HCC1Q9Y3T6 440 aaKnown RBP14.96□□□□□ -0.01
SCN3B-206ENST00000530277 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 STK11IPQ8N1F8 1099 aa14.96□□□□□ -0.01
SCN3B-206ENST00000530277 SYCE3A1L190 88 aa14.96□□□□□ -0.02
SCN3B-206ENST00000530277 EVA1CP58658 441 aa14.96□□□□□ -0.02
SCN3B-206ENST00000530277 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 ZMYM4Q5VZL5 1548 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 ABCC2Q92887 1545 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms