RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 MPNDQ8N594 471 aa18.01■□□□□ 0.47
LRP5-206ENST00000529993 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
LRP5-206ENST00000529993 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
LRP5-206ENST00000529993 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
LRP5-206ENST00000529993 TMX4Q9H1E5 349 aaPredicted RBP18■□□□□ 0.47
LRP5-206ENST00000529993 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
LRP5-206ENST00000529993 FAM83GA6ND36 823 aa18■□□□□ 0.47
LRP5-206ENST00000529993 MBD3O95983 291 aa18■□□□□ 0.47
LRP5-206ENST00000529993 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
LRP5-206ENST00000529993 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
LRP5-206ENST00000529993 NUTM1Q86Y26 1132 aa18■□□□□ 0.47
LRP5-206ENST00000529993 VPS37DQ86XT2 251 aa17.99■□□□□ 0.47
LRP5-206ENST00000529993 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
LRP5-206ENST00000529993 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
LRP5-206ENST00000529993 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
LRP5-206ENST00000529993 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
LRP5-206ENST00000529993 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
LRP5-206ENST00000529993 WASLO00401 505 aaPredicted RBP17.99■□□□□ 0.47
LRP5-206ENST00000529993 R3HCC1Q9Y3T6 440 aaKnown RBP17.99■□□□□ 0.47
LRP5-206ENST00000529993 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
LRP5-206ENST00000529993 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
LRP5-206ENST00000529993 CCAR2Q8N163 923 aaKnown RBP17.98■□□□□ 0.47
LRP5-206ENST00000529993 STK3Q13188 491 aa17.98■□□□□ 0.47
LRP5-206ENST00000529993 TATP17735 454 aaPredicted RBP17.98■□□□□ 0.47
LRP5-206ENST00000529993 STRN4Q9NRL3 753 aa17.98■□□□□ 0.47
LRP5-206ENST00000529993 MARCH6O60337 910 aa17.98■□□□□ 0.47
LRP5-206ENST00000529993 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
LRP5-206ENST00000529993 BTBD11A6QL63 1104 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 GRPEL1Q9HAV7 217 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
LRP5-206ENST00000529993 CEBPZQ03701 1054 aaKnown RBP17.97■□□□□ 0.47
LRP5-206ENST00000529993 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.97■□□□□ 0.47
LRP5-206ENST00000529993 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 SYCP2Q9BX26 1530 aa17.97■□□□□ 0.47
LRP5-206ENST00000529993 CWC22Q9HCG8 908 aaKnown RBP17.97■□□□□ 0.47
LRP5-206ENST00000529993 AACSQ86V21 672 aa17.96■□□□□ 0.47
LRP5-206ENST00000529993 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
LRP5-206ENST00000529993 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
LRP5-206ENST00000529993 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
LRP5-206ENST00000529993 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
LRP5-206ENST00000529993 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
LRP5-206ENST00000529993 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
LRP5-206ENST00000529993 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
LRP5-206ENST00000529993 DDX54Q8TDD1 881 aaKnown RBP17.95■□□□□ 0.46
LRP5-206ENST00000529993 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
LRP5-206ENST00000529993 FYB1O15117 783 aa17.94■□□□□ 0.46
LRP5-206ENST00000529993 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
LRP5-206ENST00000529993 TPM3P06753 285 aa17.94■□□□□ 0.46
LRP5-206ENST00000529993 TSPY26PQ9H489 355 aa17.94■□□□□ 0.46
LRP5-206ENST00000529993 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
LRP5-206ENST00000529993 VPS53Q5VIR6 699 aa17.94■□□□□ 0.46
LRP5-206ENST00000529993 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
LRP5-206ENST00000529993 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
LRP5-206ENST00000529993 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
LRP5-206ENST00000529993 PLCH2O75038 1416 aa17.93■□□□□ 0.46
LRP5-206ENST00000529993 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
LRP5-206ENST00000529993 CABP4P57796 275 aa17.93■□□□□ 0.46
LRP5-206ENST00000529993 HIP1O00291 1037 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 RAD21O60216 631 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 ANKLE2Q86XL3 938 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 CARD14Q9BXL6 1004 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 WDR62O43379 1518 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 CCDC39Q9UFE4 941 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 ERICH2A1L162 156 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 PDCP20941 246 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 MX1P20591 662 aa17.92■□□□□ 0.46
LRP5-206ENST00000529993 HOMER1Q86YM7 354 aa17.91■□□□□ 0.46
LRP5-206ENST00000529993 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
LRP5-206ENST00000529993 ATP2B1P20020 1258 aa17.91■□□□□ 0.46
LRP5-206ENST00000529993 AMOTL2Q9Y2J4 779 aa17.91■□□□□ 0.46
LRP5-206ENST00000529993 PZPP20742 1482 aa17.91■□□□□ 0.46
LRP5-206ENST00000529993 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
LRP5-206ENST00000529993 TRIM5Q9C035 493 aa17.9■□□□□ 0.46
LRP5-206ENST00000529993 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
LRP5-206ENST00000529993 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
LRP5-206ENST00000529993 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
LRP5-206ENST00000529993 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
LRP5-206ENST00000529993 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
LRP5-206ENST00000529993 SAFBQ15424 915 aaKnown RBP eCLIP17.89■□□□□ 0.45
LRP5-206ENST00000529993 RLBP1P12271 317 aa17.89■□□□□ 0.45
LRP5-206ENST00000529993 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.45
LRP5-206ENST00000529993 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
LRP5-206ENST00000529993 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
LRP5-206ENST00000529993 KIAA0556O60303 1618 aa17.89■□□□□ 0.45
LRP5-206ENST00000529993 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
LRP5-206ENST00000529993 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 SPC24Q8NBT2 197 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
LRP5-206ENST00000529993 NSD2O96028 1365 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 TAF7Q15545 349 aaPredicted RBP17.88■□□□□ 0.45
LRP5-206ENST00000529993 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 SSFA2P28290 1259 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
LRP5-206ENST00000529993 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
LRP5-206ENST00000529993 MPRIPQ6WCQ1 1025 aa17.87■□□□□ 0.45
LRP5-206ENST00000529993 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
LRP5-206ENST00000529993 PDE4CQ08493 712 aa17.87■□□□□ 0.45
LRP5-206ENST00000529993 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms