RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 PHACTR3Q96KR7 559 aa30.16■■■□□ 2.42
LTBP3-214ENST00000529582 DCCP43146 1447 aa30.15■■■□□ 2.42
LTBP3-214ENST00000529582 PLIN1O60240 522 aa30.14■■■□□ 2.42
LTBP3-214ENST00000529582 XIRP1Q702N8 1843 aaKnown RBP30.13■■■□□ 2.41
LTBP3-214ENST00000529582 NFE2L2Q16236 605 aa30.13■■■□□ 2.41
LTBP3-214ENST00000529582 MST1RQ04912 1400 aa30.13■■■□□ 2.41
LTBP3-214ENST00000529582 TRPM3Q9HCF6 1732 aaPredicted RBP30.13■■■□□ 2.41
LTBP3-214ENST00000529582 ATF3P18847 181 aa30.12■■■□□ 2.41
LTBP3-214ENST00000529582 FOXO3O43524 673 aa30.12■■■□□ 2.41
LTBP3-214ENST00000529582 AMPHP49418 695 aa30.12■■■□□ 2.41
LTBP3-214ENST00000529582 MYH16Q9H6N6 1097 aa30.12■■■□□ 2.41
LTBP3-214ENST00000529582 DLG5Q8TDM6 1919 aa30.11■■■□□ 2.41
LTBP3-214ENST00000529582 KIF24Q5T7B8 1368 aa30.1■■■□□ 2.41
LTBP3-214ENST00000529582 LTN1O94822 1766 aa30.1■■■□□ 2.41
LTBP3-214ENST00000529582 B4GALNT3Q6L9W6 998 aa30.1■■■□□ 2.41
LTBP3-214ENST00000529582 IL16Q14005 1332 aa30.09■■■□□ 2.41
LTBP3-214ENST00000529582 SULT6B1Q6IMI4 303 aa30.08■■■□□ 2.41
LTBP3-214ENST00000529582 AEBP1Q8IUX7 1158 aa30.08■■■□□ 2.41
LTBP3-214ENST00000529582 NFAT5O94916 1531 aa30.08■■■□□ 2.41
LTBP3-214ENST00000529582 EXOC6Q8TAG9 804 aa30.08■■■□□ 2.41
LTBP3-214ENST00000529582 XPCQ01831 940 aaPredicted RBP30.07■■■□□ 2.4
LTBP3-214ENST00000529582 ARHGEF10O15013 1369 aa30.06■■■□□ 2.4
LTBP3-214ENST00000529582 HOXC9P31274 260 aa30.05■■■□□ 2.4
LTBP3-214ENST00000529582 KRT28Q7Z3Y7 464 aa30.04■■■□□ 2.4
LTBP3-214ENST00000529582 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.04■■■□□ 2.4
LTBP3-214ENST00000529582 FANCIQ9NVI1 1328 aa30.03■■■□□ 2.4
LTBP3-214ENST00000529582 BCAR3O75815 825 aa30.03■■■□□ 2.4
LTBP3-214ENST00000529582 CADPS2Q86UW7 1296 aa30.03■■■□□ 2.4
LTBP3-214ENST00000529582 MSH6P52701 1360 aa30.03■■■□□ 2.4
LTBP3-214ENST00000529582 RTL1A6NKG5 1358 aa30.02■■■□□ 2.4
LTBP3-214ENST00000529582 TSR2Q969E8 191 aaKnown RBP30.02■■■□□ 2.4
LTBP3-214ENST00000529582 C20orf194Q5TEA3 1177 aa30.01■■■□□ 2.39
LTBP3-214ENST00000529582 SLIT3O75094 1523 aa30.01■■■□□ 2.39
LTBP3-214ENST00000529582 ALS2Q96Q42 1657 aa30■■■□□ 2.39
LTBP3-214ENST00000529582 KCNH5Q8NCM2 988 aa29.99■■■□□ 2.39
LTBP3-214ENST00000529582 CRBNQ96SW2 442 aa29.99■■■□□ 2.39
LTBP3-214ENST00000529582 PHRF1Q9P1Y6 1649 aaKnown RBP29.98■■■□□ 2.39
LTBP3-214ENST00000529582 IGSF1Q8N6C5 1336 aa29.98■■■□□ 2.39
LTBP3-214ENST00000529582 CCDC136Q96JN2 1154 aa29.98■■■□□ 2.39
LTBP3-214ENST00000529582 ZNF335Q9H4Z2 1342 aaPredicted RBP29.98■■■□□ 2.39
LTBP3-214ENST00000529582 EYA1Q99502 592 aa29.97■■■□□ 2.39
LTBP3-214ENST00000529582 KDRP35968 1356 aa29.97■■■□□ 2.39
LTBP3-214ENST00000529582 RARSP54136 660 aaKnown RBP29.97■■■□□ 2.39
LTBP3-214ENST00000529582 LMOD3Q0VAK6 560 aa29.97■■■□□ 2.39
LTBP3-214ENST00000529582 CALD1Q05682 793 aaKnown RBP29.95■■■□□ 2.38
LTBP3-214ENST00000529582 EXOSC9Q06265 439 aaKnown RBP29.95■■■□□ 2.38
LTBP3-214ENST00000529582 IP6K1Q92551 441 aa29.95■■■□□ 2.38
LTBP3-214ENST00000529582 USP19O94966 1318 aa29.94■■■□□ 2.38
LTBP3-214ENST00000529582 CT47B1P0C2W7 299 aaPredicted RBP29.94■■■□□ 2.38
LTBP3-214ENST00000529582 LMOD2Q6P5Q4 547 aa29.94■■■□□ 2.38
LTBP3-214ENST00000529582 THUMPD2Q9BTF0 503 aaKnown RBP29.94■■■□□ 2.38
LTBP3-214ENST00000529582 GCP02774 474 aa29.91■■■□□ 2.38
LTBP3-214ENST00000529582 DDX17Q92841 729 aaKnown RBP29.91■■■□□ 2.38
LTBP3-214ENST00000529582 LTV1Q96GA3 475 aaPredicted RBP29.9■■■□□ 2.38
LTBP3-214ENST00000529582 FAM83GA6ND36 823 aa29.89■■■□□ 2.37
LTBP3-214ENST00000529582 IFT57Q9NWB7 429 aa29.89■■■□□ 2.37
LTBP3-214ENST00000529582 LAS1LQ9Y4W2 734 aaKnown RBP29.89■■■□□ 2.37
LTBP3-214ENST00000529582 NPHP3Q7Z494 1330 aa29.88■■■□□ 2.37
LTBP3-214ENST00000529582 ZNF853P0CG23 659 aa29.87■■■□□ 2.37
LTBP3-214ENST00000529582 GNAI1P63096 354 aa29.87■■■□□ 2.37
LTBP3-214ENST00000529582 ARHGEF25Q86VW2 580 aa29.87■■■□□ 2.37
LTBP3-214ENST00000529582 MED1Q15648 1581 aaPredicted RBP29.87■■■□□ 2.37
LTBP3-214ENST00000529582 ZBTB7CA1YPR0 619 aa29.87■■■□□ 2.37
LTBP3-214ENST00000529582 PXDNQ92626 1479 aa29.86■■■□□ 2.37
LTBP3-214ENST00000529582 PLEKHG5O94827 1062 aa29.86■■■□□ 2.37
LTBP3-214ENST00000529582 DCTN1Q14203 1278 aa29.85■■■□□ 2.37
LTBP3-214ENST00000529582 CANXP27824 592 aaKnown RBP29.85■■■□□ 2.37
LTBP3-214ENST00000529582 RGPD2P0DJD1 1756 aa29.84■■■□□ 2.37
LTBP3-214ENST00000529582 PDE3AQ14432 1141 aa29.84■■■□□ 2.37
LTBP3-214ENST00000529582 MTHFSDQ2M296 383 aaKnown RBP29.84■■■□□ 2.37
LTBP3-214ENST00000529582 BCL2L13Q9BXK5 485 aa29.83■■■□□ 2.37
LTBP3-214ENST00000529582 CFAP44Q96MT7 982 aa29.82■■■□□ 2.37
LTBP3-214ENST00000529582 TNS3Q68CZ2 1445 aa29.82■■■□□ 2.36
LTBP3-214ENST00000529582 FRAT1Q92837 279 aaPredicted RBP29.82■■■□□ 2.36
LTBP3-214ENST00000529582 BRINP3Q76B58 766 aa29.81■■■□□ 2.36
LTBP3-214ENST00000529582 MBIPQ9NS73 344 aa29.81■■■□□ 2.36
LTBP3-214ENST00000529582 GAS2L2Q8NHY3 880 aa29.8■■■□□ 2.36
LTBP3-214ENST00000529582 MCM10Q7L590 875 aa29.78■■■□□ 2.36
LTBP3-214ENST00000529582 RGPD5Q99666 1765 aa29.78■■■□□ 2.36
LTBP3-214ENST00000529582 USHBP1Q8N6Y0 703 aa29.78■■■□□ 2.36
LTBP3-214ENST00000529582 SSH1Q8WYL5 1049 aa29.78■■■□□ 2.36
LTBP3-214ENST00000529582 SLAIN2Q9P270 581 aa29.78■■■□□ 2.36
LTBP3-214ENST00000529582 CRYBG1Q9Y4K1 1723 aa29.77■■■□□ 2.36
LTBP3-214ENST00000529582 NBPF6Q5VWK0 638 aa29.77■■■□□ 2.36
LTBP3-214ENST00000529582 NBPF4Q96M43 638 aa29.77■■■□□ 2.36
LTBP3-214ENST00000529582 SPATA31A3Q5VYP0 1347 aa29.77■■■□□ 2.36
LTBP3-214ENST00000529582 PANK1Q8TE04 598 aa29.76■■■□□ 2.36
LTBP3-214ENST00000529582 SMC4Q9NTJ3 1288 aa29.76■■■□□ 2.36
LTBP3-214ENST00000529582 TSHZ2Q9NRE2 1034 aa29.76■■■□□ 2.35
LTBP3-214ENST00000529582 CRB1P82279 1406 aa29.74■■■□□ 2.35
LTBP3-214ENST00000529582 ALDH1L2Q3SY69 923 aa29.73■■■□□ 2.35
LTBP3-214ENST00000529582 ANKRD24Q8TF21 1146 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 RTF1Q92541 710 aaKnown RBP29.72■■■□□ 2.35
LTBP3-214ENST00000529582 ZNF428Q96B54 188 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 TNNQ9UQP3 1299 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 CAMTA1Q9Y6Y1 1673 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 VAMP4O75379 141 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 ZC3H6P61129 1189 aaKnown RBP29.72■■■□□ 2.35
LTBP3-214ENST00000529582 ZKSCAN2Q63HK3 967 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 LRRC59Q96AG4 307 aaKnown RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms