RNA–Protein interactions for RNA: ENST00000528651.1

SCUBE2-209, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-209ENST00000528651 LMOD3Q0VAK6 560 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 GSE1Q14687 1217 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 NFKBIBQ15653 356 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 SLAIN1Q8ND83 568 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 PANK1Q8TE04 598 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 FRAT1Q92837 279 aaPredicted RBP6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 CABP2Q9NPB3 220 aa6.48□□□□□ -1.37
SCUBE2-209ENST00000528651 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 TNNT2P45379 298 aaPredicted RBP6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 NEUROD2Q15784 382 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 ATF7IPQ6VMQ6 1270 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 PRAM1Q96QH2 718 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 FAM135BQ49AJ0 1406 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 SPATA31D1Q6ZQQ2 1576 aa6.47□□□□□ -1.37
SCUBE2-209ENST00000528651 KIF24Q5T7B8 1368 aa6.46□□□□□ -1.37
SCUBE2-209ENST00000528651 EDC4Q6P2E9 1401 aaKnown RBP6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 TBC1D32Q96NH3 1257 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 CDK19Q9BWU1 502 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 SMC4Q9NTJ3 1288 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 YEATS2Q9ULM3 1422 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 TRIM35Q9UPQ4 493 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 LAS1LQ9Y4W2 734 aaKnown RBP6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 PCDHB15Q9Y5E8 787 aa6.46□□□□□ -1.38
SCUBE2-209ENST00000528651 TECPR2O15040 1411 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 CPSF1Q10570 1443 aaKnown RBP6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 RLBP1P12271 317 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 RIPK4P57078 832 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 GNAI1P63096 354 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 SMC5Q8IY18 1101 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 GCC1Q96CN9 775 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 STAG3Q9UJ98 1225 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 PDZRN3Q9UPQ7 1066 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 RRP7AQ9Y3A4 280 aaKnown RBP6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 A2ML1A8K2U0 1454 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 USP19O94966 1318 aa6.45□□□□□ -1.38
SCUBE2-209ENST00000528651 PIK3R4Q99570 1358 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 RIMS2Q9UQ26 1411 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 KIF20BQ96Q89 1820 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 ATXN8OSP0DMR3 200 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 TRIM27P14373 513 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 NFE2L2Q16236 605 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 GGNBP2Q9H3C7 697 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 ZBTB40Q9NUA8 1239 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 CDK12Q9NYV4 1490 aaPredicted RBP6.44□□□□□ -1.38
SCUBE2-209ENST00000528651 PTMSP20962 102 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 SSH1Q8WYL5 1049 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 RSPH6AQ9H0K4 717 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 STK26Q9P289 416 aa6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 MINK1Q8N4C8 1332 aaPredicted RBP6.43□□□□□ -1.38
SCUBE2-209ENST00000528651 PTCH1Q13635 1447 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 WASLO00401 505 aaPredicted RBP6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 ZNF853P0CG23 659 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 NUCB1Q02818 461 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 SKAP1Q86WV1 359 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 ITPRIPQ8IWB1 547 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 MARVELD3Q96A59 401 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 API5Q9BZZ5 524 aaKnown RBP6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 POLKQ9UBT6 870 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 NOB1Q9ULX3 412 aaKnown RBP6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 COLQQ9Y215 455 aaPredicted RBP6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 DIP2BQ9P265 1576 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 KNDC1Q76NI1 1749 aa6.42□□□□□ -1.38
SCUBE2-209ENST00000528651 CPS1P31327 1500 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 SEC24BO95487 1268 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 RBM25P49756 843 aaKnown RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 SAFB2Q14151 953 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 BMP2KLQ5H9B9 411 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 L1TD1Q5T7N2 865 aaKnown RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 NUTM2DQ5VT03 806 aaPredicted RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 IL27Q8NEV9 243 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 SNX21Q969T3 373 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 COG3Q96JB2 828 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 C22orf23Q9BZE7 217 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 BMP2KQ9NSY1 1161 aaPredicted RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 CCDC61Q9Y6R9 512 aa6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 SETD1AO15047 1707 aaKnown RBP6.41□□□□□ -1.38
SCUBE2-209ENST00000528651 CFAP65Q6ZU64 1925 aaKnown RBP6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 LRRC7Q96NW7 1537 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 RIMBP3CA6NJZ7 1639 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 RIMBP3BA6NNM3 1639 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 RIMBP3Q9UFD9 1639 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 ZBTB7BO15156 539 aaPredicted RBP6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 PRKAR2BP31323 418 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 IL13P35225 146 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 TMEM57Q8N5G2 664 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 TSR2Q969E8 191 aaKnown RBP6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 BCL2L13Q9BXK5 485 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 ESF1Q9H501 851 aaKnown RBP6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 CHMP5Q9NZZ3 219 aa6.4□□□□□ -1.38
SCUBE2-209ENST00000528651 MYO5BQ9ULV0 1848 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms