RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TMPOP42166 694 aaKnown RBP21.78■■□□□ 1.08
LTBP3-210ENST00000528516 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
LTBP3-210ENST00000528516 TSC1Q92574 1164 aa21.77■■□□□ 1.08
LTBP3-210ENST00000528516 KIF16BQ96L93 1317 aa21.77■■□□□ 1.08
LTBP3-210ENST00000528516 SYCE3A1L190 88 aa21.77■■□□□ 1.08
LTBP3-210ENST00000528516 CD2BP2O95400 341 aaKnown RBP21.76■■□□□ 1.07
LTBP3-210ENST00000528516 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
LTBP3-210ENST00000528516 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
LTBP3-210ENST00000528516 NUCB2P80303 420 aa21.75■■□□□ 1.07
LTBP3-210ENST00000528516 ZFYVE16Q7Z3T8 1539 aa21.75■■□□□ 1.07
LTBP3-210ENST00000528516 GNAI1P63096 354 aa21.75■■□□□ 1.07
LTBP3-210ENST00000528516 BBXQ8WY36 941 aaPredicted RBP21.74■■□□□ 1.07
LTBP3-210ENST00000528516 FAM177BA6PVY3 158 aa21.74■■□□□ 1.07
LTBP3-210ENST00000528516 TULP1O00294 542 aaPredicted RBP21.74■■□□□ 1.07
LTBP3-210ENST00000528516 RBM25P49756 843 aaKnown RBP21.74■■□□□ 1.07
LTBP3-210ENST00000528516 CCDC94Q9BW85 323 aaPredicted RBP21.74■■□□□ 1.07
LTBP3-210ENST00000528516 AIMP1Q12904 312 aaKnown RBP21.73■■□□□ 1.07
LTBP3-210ENST00000528516 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
LTBP3-210ENST00000528516 EMILIN1Q9Y6C2 1016 aa21.73■■□□□ 1.07
LTBP3-210ENST00000528516 NLRP6P59044 892 aa21.73■■□□□ 1.07
LTBP3-210ENST00000528516 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
LTBP3-210ENST00000528516 MAST1Q9Y2H9 1570 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 SLC4A2P04920 1241 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 MAP4K4O95819 1239 aaPredicted RBP21.72■■□□□ 1.07
LTBP3-210ENST00000528516 TRIM27P14373 513 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 CDK11BP21127 795 aaKnown RBP21.72■■□□□ 1.07
LTBP3-210ENST00000528516 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 HS1BP3Q53T59 392 aa21.72■■□□□ 1.07
LTBP3-210ENST00000528516 POGZQ7Z3K3 1410 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 ZNF500O60304 480 aaPredicted RBP21.71■■□□□ 1.07
LTBP3-210ENST00000528516 E9PCH4 1651 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 SMARCA5O60264 1052 aaPredicted RBP21.71■■□□□ 1.07
LTBP3-210ENST00000528516 FOSBP53539 338 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 IDI1Q13907 227 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 PIK3C2GO75747 1445 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 MCM10Q7L590 875 aa21.71■■□□□ 1.07
LTBP3-210ENST00000528516 FAM83GA6ND36 823 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 PLXNC1O60486 1568 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 TEFQ10587 303 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 IGSF3O75054 1194 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 SPDYE4A6NLX3 237 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 NEK4P51957 841 aa21.7■■□□□ 1.06
LTBP3-210ENST00000528516 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
LTBP3-210ENST00000528516 PDE4CQ08493 712 aa21.69■■□□□ 1.06
LTBP3-210ENST00000528516 JARID2Q92833 1246 aaPredicted RBP21.69■■□□□ 1.06
LTBP3-210ENST00000528516 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
LTBP3-210ENST00000528516 PPP4R3BQ5MIZ7 849 aa21.68■■□□□ 1.06
LTBP3-210ENST00000528516 NME9Q86XW9 330 aa21.68■■□□□ 1.06
LTBP3-210ENST00000528516 ASXL1Q8IXJ9 1541 aa21.68■■□□□ 1.06
LTBP3-210ENST00000528516 CHAF1AQ13111 956 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-210ENST00000528516 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
LTBP3-210ENST00000528516 ZNF830Q96NB3 372 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-210ENST00000528516 ZNF445P59923 1031 aa21.67■■□□□ 1.06
LTBP3-210ENST00000528516 HDAC1Q13547 482 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-210ENST00000528516 ZNF771Q7L3S4 317 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-210ENST00000528516 GPRASP1Q5JY77 1395 aa21.67■■□□□ 1.06
LTBP3-210ENST00000528516 ZMYM3Q14202 1370 aa21.67■■□□□ 1.06
LTBP3-210ENST00000528516 ATP10AO60312 1499 aa21.67■■□□□ 1.06
LTBP3-210ENST00000528516 C9orf78Q9NZ63 289 aaPredicted RBP21.66■■□□□ 1.06
LTBP3-210ENST00000528516 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
LTBP3-210ENST00000528516 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
LTBP3-210ENST00000528516 EXOC6BQ9Y2D4 811 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 F6X3S4 739 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 MCM5P33992 734 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 DMTNQ08495 405 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 CCDC27Q2M243 656 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 STAC3Q96MF2 364 aa21.65■■□□□ 1.06
LTBP3-210ENST00000528516 TSHZ3Q63HK5 1081 aa21.64■■□□□ 1.06
LTBP3-210ENST00000528516 FBXW7Q969H0 707 aa21.64■■□□□ 1.06
LTBP3-210ENST00000528516 TSPOAP1O95153 1857 aa21.64■■□□□ 1.06
LTBP3-210ENST00000528516 DDX54Q8TDD1 881 aaKnown RBP21.64■■□□□ 1.05
LTBP3-210ENST00000528516 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.05
LTBP3-210ENST00000528516 DDIT3P35638 169 aa21.64■■□□□ 1.05
LTBP3-210ENST00000528516 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
LTBP3-210ENST00000528516 VPS37CA5D8V6 355 aaPredicted RBP21.63■■□□□ 1.05
LTBP3-210ENST00000528516 SURF6O75683 361 aaKnown RBP21.63■■□□□ 1.05
LTBP3-210ENST00000528516 PKP1Q13835 747 aa21.63■■□□□ 1.05
LTBP3-210ENST00000528516 CDC45O75419 566 aa21.63■■□□□ 1.05
LTBP3-210ENST00000528516 REC8O95072 547 aa21.63■■□□□ 1.05
LTBP3-210ENST00000528516 NOS1P29475 1434 aa21.63■■□□□ 1.05
LTBP3-210ENST00000528516 UNC13BO14795 1591 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 HMGN5P82970 282 aaKnown RBP21.62■■□□□ 1.05
LTBP3-210ENST00000528516 NUCB1Q02818 461 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 LARP6Q9BRS8 491 aaKnown RBP21.62■■□□□ 1.05
LTBP3-210ENST00000528516 BMP2KLQ5H9B9 411 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 LMBRD1Q9NUN5 540 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 KIF3AQ9Y496 699 aa21.62■■□□□ 1.05
LTBP3-210ENST00000528516 RABEP1Q15276 862 aa21.61■■□□□ 1.05
LTBP3-210ENST00000528516 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
LTBP3-210ENST00000528516 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
LTBP3-210ENST00000528516 TSPY26PQ9H489 355 aa21.61■■□□□ 1.05
LTBP3-210ENST00000528516 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
LTBP3-210ENST00000528516 SYAP1Q96A49 352 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-210ENST00000528516 LRSAM1Q6UWE0 723 aa21.6■■□□□ 1.05
LTBP3-210ENST00000528516 DIAPH3Q9NSV4 1193 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms