RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
AP003555.1-201ENST00000528316 PRAM1Q96QH2 718 aa12.27□□□□□ -0.45
AP003555.1-201ENST00000528316 SOX12O15370 315 aa12.26□□□□□ -0.45
AP003555.1-201ENST00000528316 RXRBP28702 533 aa12.26□□□□□ -0.45
AP003555.1-201ENST00000528316 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
AP003555.1-201ENST00000528316 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
AP003555.1-201ENST00000528316 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
AP003555.1-201ENST00000528316 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
AP003555.1-201ENST00000528316 MYOM2P54296 1465 aa12.25□□□□□ -0.45
AP003555.1-201ENST00000528316 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
AP003555.1-201ENST00000528316 POGKQ9P215 609 aa12.24□□□□□ -0.45
AP003555.1-201ENST00000528316 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
AP003555.1-201ENST00000528316 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
AP003555.1-201ENST00000528316 LAMC1P11047 1609 aa12.22□□□□□ -0.45
AP003555.1-201ENST00000528316 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
AP003555.1-201ENST00000528316 PXDNQ92626 1479 aa12.21□□□□□ -0.45
AP003555.1-201ENST00000528316 USP21Q9UK80 565 aa12.21□□□□□ -0.45
AP003555.1-201ENST00000528316 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 SPATA31A3Q5VYP0 1347 aa12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 RBM6P78332 1123 aaKnown RBP12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
AP003555.1-201ENST00000528316 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
AP003555.1-201ENST00000528316 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
AP003555.1-201ENST00000528316 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
AP003555.1-201ENST00000528316 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
AP003555.1-201ENST00000528316 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
AP003555.1-201ENST00000528316 PSME1Q06323 249 aa12.18□□□□□ -0.46
AP003555.1-201ENST00000528316 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
AP003555.1-201ENST00000528316 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
AP003555.1-201ENST00000528316 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
AP003555.1-201ENST00000528316 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
AP003555.1-201ENST00000528316 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
AP003555.1-201ENST00000528316 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
AP003555.1-201ENST00000528316 TRPC5Q9UL62 973 aaPredicted RBP12.16□□□□□ -0.46
AP003555.1-201ENST00000528316 RGS12O14924 1447 aa12.15□□□□□ -0.46
AP003555.1-201ENST00000528316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
AP003555.1-201ENST00000528316 NBPF1Q3BBV0 1214 aa12.15□□□□□ -0.46
AP003555.1-201ENST00000528316 LMOD2Q6P5Q4 547 aa12.15□□□□□ -0.46
AP003555.1-201ENST00000528316 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
AP003555.1-201ENST00000528316 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.47
AP003555.1-201ENST00000528316 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
AP003555.1-201ENST00000528316 PBX2P40425 430 aa12.14□□□□□ -0.47
AP003555.1-201ENST00000528316 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
AP003555.1-201ENST00000528316 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
AP003555.1-201ENST00000528316 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
AP003555.1-201ENST00000528316 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
AP003555.1-201ENST00000528316 ATRNO75882 1429 aa12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 NUDT7P0C024 238 aa12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
AP003555.1-201ENST00000528316 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 KIF3CO14782 793 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 L3MBTL2Q969R5 705 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
AP003555.1-201ENST00000528316 FAM83GA6ND36 823 aa12.1□□□□□ -0.47
AP003555.1-201ENST00000528316 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
AP003555.1-201ENST00000528316 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
AP003555.1-201ENST00000528316 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
AP003555.1-201ENST00000528316 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
AP003555.1-201ENST00000528316 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
AP003555.1-201ENST00000528316 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.48
AP003555.1-201ENST00000528316 GPRASP1Q5JY77 1395 aa12.08□□□□□ -0.48
AP003555.1-201ENST00000528316 SLIT2O94813 1529 aa12.08□□□□□ -0.48
AP003555.1-201ENST00000528316 TULP4Q9NRJ4 1543 aa12.07□□□□□ -0.48
AP003555.1-201ENST00000528316 VPS72Q15906 364 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 ACEP12821 1306 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
AP003555.1-201ENST00000528316 ATP7BP35670 1465 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 ARHGEF28Q8N1W1 1705 aaKnown RBP12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 PLEKHG3A1L390 1219 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 NLRP6P59044 892 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 CENPJQ9HC77 1338 aaPredicted RBP12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 EP400Q96L91 3159 aa12.04□□□□□ -0.48
AP003555.1-201ENST00000528316 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
AP003555.1-201ENST00000528316 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
AP003555.1-201ENST00000528316 SEPT12Q8IYM1 358 aa12.03□□□□□ -0.48
AP003555.1-201ENST00000528316 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
AP003555.1-201ENST00000528316 SLC34A2O95436 690 aa12.02□□□□□ -0.49
AP003555.1-201ENST00000528316 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
AP003555.1-201ENST00000528316 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
AP003555.1-201ENST00000528316 TRPM3Q9HCF6 1732 aaPredicted RBP12.02□□□□□ -0.49
AP003555.1-201ENST00000528316 GLI3P10071 1580 aa12.01□□□□□ -0.49
AP003555.1-201ENST00000528316 KIAA1210Q9ULL0 1709 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms