RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
PTP4A2-210ENST00000528253 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
PTP4A2-210ENST00000528253 COL22A1Q8NFW1 1626 aaPredicted RBP10.18□□□□□ -0.78
PTP4A2-210ENST00000528253 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 PRR36Q9H6K5 1346 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 NGLY1Q96IV0 654 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 CARD11Q9BXL7 1154 aa10.17□□□□□ -0.78
PTP4A2-210ENST00000528253 EVC2Q86UK5 1308 aa10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 SOCS7O14512 581 aa10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 ATMINO43313 823 aaPredicted RBP10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
PTP4A2-210ENST00000528253 SBNO1A3KN83 1393 aa10.15□□□□□ -0.78
PTP4A2-210ENST00000528253 AFF2P51816 1311 aa10.15□□□□□ -0.78
PTP4A2-210ENST00000528253 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
PTP4A2-210ENST00000528253 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.79
PTP4A2-210ENST00000528253 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 PCDHB8Q9UN66 801 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 ATP7BP35670 1465 aa10.14□□□□□ -0.79
PTP4A2-210ENST00000528253 TRPM3Q9HCF6 1732 aaPredicted RBP10.13□□□□□ -0.79
PTP4A2-210ENST00000528253 TOPAZ1Q8N9V7 1692 aa10.13□□□□□ -0.79
PTP4A2-210ENST00000528253 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
PTP4A2-210ENST00000528253 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
PTP4A2-210ENST00000528253 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
PTP4A2-210ENST00000528253 ACEP12821 1306 aa10.12□□□□□ -0.79
PTP4A2-210ENST00000528253 RXRBP28702 533 aa10.12□□□□□ -0.79
PTP4A2-210ENST00000528253 USP21Q9UK80 565 aa10.12□□□□□ -0.79
PTP4A2-210ENST00000528253 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
PTP4A2-210ENST00000528253 ALS2Q96Q42 1657 aa10.12□□□□□ -0.79
PTP4A2-210ENST00000528253 PSEN1P49768 467 aa10.11□□□□□ -0.79
PTP4A2-210ENST00000528253 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
PTP4A2-210ENST00000528253 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
PTP4A2-210ENST00000528253 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
PTP4A2-210ENST00000528253 POLR3AO14802 1390 aaPredicted RBP10.11□□□□□ -0.79
PTP4A2-210ENST00000528253 MS4A3Q96HJ5 214 aa10.1□□□□□ -0.79
PTP4A2-210ENST00000528253 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
PTP4A2-210ENST00000528253 ABCA3Q99758 1704 aa10.1□□□□□ -0.79
PTP4A2-210ENST00000528253 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
PTP4A2-210ENST00000528253 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
PTP4A2-210ENST00000528253 SBNO2Q9Y2G9 1366 aa10.09□□□□□ -0.79
PTP4A2-210ENST00000528253 ST20-MTHFSA0A0A6YYL1 179 aa10.08□□□□□ -0.8
PTP4A2-210ENST00000528253 NBR1Q14596 966 aa10.08□□□□□ -0.8
PTP4A2-210ENST00000528253 BRD4O60885 1362 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-210ENST00000528253 ATAD2Q6PL18 1390 aa10.08□□□□□ -0.8
PTP4A2-210ENST00000528253 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
PTP4A2-210ENST00000528253 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
PTP4A2-210ENST00000528253 NLRP13Q86W25 1043 aa10.07□□□□□ -0.8
PTP4A2-210ENST00000528253 UNC5CLQ8IV45 518 aa10.07□□□□□ -0.8
PTP4A2-210ENST00000528253 NWD2Q9ULI1 1742 aa10.07□□□□□ -0.8
PTP4A2-210ENST00000528253 PLCH1Q4KWH8 1693 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 MAP3K13O43283 966 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 NUTM2GQ5VZR2 741 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 IFNL1Q8IU54 200 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 TMC1Q8TDI8 760 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 PUS7Q96PZ0 661 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-210ENST00000528253 BCL9LQ86UU0 1499 aa10.05□□□□□ -0.8
PTP4A2-210ENST00000528253 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
PTP4A2-210ENST00000528253 COL14A1Q05707 1796 aaKnown RBP10.05□□□□□ -0.8
PTP4A2-210ENST00000528253 CDK12Q9NYV4 1490 aaPredicted RBP10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 SLIT2O94813 1529 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 NLRP6P59044 892 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 TMF1P82094 1093 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 HDGFL2Q7Z4V5 671 aaPredicted RBP10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 GJD4Q96KN9 370 aaPredicted RBP10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 PRDM11Q9NQV5 511 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 ATRNO75882 1429 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 USP6P35125 1406 aa10.04□□□□□ -0.8
PTP4A2-210ENST00000528253 KTN1Q86UP2 1357 aaKnown RBP10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 USP47Q96K76 1375 aa10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 ZC3H6P61129 1189 aaKnown RBP10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 TESK2Q96S53 571 aa10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 BTG4Q9NY30 223 aa10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
PTP4A2-210ENST00000528253 MON2Q7Z3U7 1717 aa10.02□□□□□ -0.8
PTP4A2-210ENST00000528253 VPS72Q15906 364 aa10.02□□□□□ -0.81
PTP4A2-210ENST00000528253 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
PTP4A2-210ENST00000528253 SLC12A5Q9H2X9 1139 aa10.02□□□□□ -0.81
PTP4A2-210ENST00000528253 TTC21BQ7Z4L5 1316 aa10.02□□□□□ -0.81
PTP4A2-210ENST00000528253 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
PTP4A2-210ENST00000528253 CPSF1Q10570 1443 aaKnown RBP10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 ST18O60284 1047 aa10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 GCP02774 474 aa10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 ATN1P54259 1190 aaPredicted RBP10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 EVA1CP58658 441 aa10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
PTP4A2-210ENST00000528253 PIK3C2AO00443 1686 aa10□□□□□ -0.81
PTP4A2-210ENST00000528253 NRAPQ86VF7 1730 aa10□□□□□ -0.81
PTP4A2-210ENST00000528253 CHRNA2Q15822 529 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms