RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
MSRA-210ENST00000528246 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
MSRA-210ENST00000528246 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
MSRA-210ENST00000528246 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
MSRA-210ENST00000528246 HSPA1LP34931 641 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 DDIT3P35638 169 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 RIPK4P57078 832 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
MSRA-210ENST00000528246 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
MSRA-210ENST00000528246 POGKQ9P215 609 aa12.91□□□□□ -0.34
MSRA-210ENST00000528246 NOB1Q9ULX3 412 aaKnown RBP12.91□□□□□ -0.34
MSRA-210ENST00000528246 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
MSRA-210ENST00000528246 HSCBQ8IWL3 235 aa12.9□□□□□ -0.34
MSRA-210ENST00000528246 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
MSRA-210ENST00000528246 MYO5BQ9ULV0 1848 aa12.89□□□□□ -0.35
MSRA-210ENST00000528246 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
MSRA-210ENST00000528246 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
MSRA-210ENST00000528246 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
MSRA-210ENST00000528246 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
MSRA-210ENST00000528246 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
MSRA-210ENST00000528246 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
MSRA-210ENST00000528246 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
MSRA-210ENST00000528246 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
MSRA-210ENST00000528246 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
MSRA-210ENST00000528246 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
MSRA-210ENST00000528246 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
MSRA-210ENST00000528246 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
MSRA-210ENST00000528246 GNAI1P63096 354 aa12.87□□□□□ -0.35
MSRA-210ENST00000528246 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
MSRA-210ENST00000528246 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
MSRA-210ENST00000528246 MRE11P49959 708 aa12.86□□□□□ -0.35
MSRA-210ENST00000528246 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
MSRA-210ENST00000528246 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
MSRA-210ENST00000528246 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
MSRA-210ENST00000528246 ABCC4O15439 1325 aa12.86□□□□□ -0.35
MSRA-210ENST00000528246 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
MSRA-210ENST00000528246 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
MSRA-210ENST00000528246 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
MSRA-210ENST00000528246 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
MSRA-210ENST00000528246 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
MSRA-210ENST00000528246 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
MSRA-210ENST00000528246 KNDC1Q76NI1 1749 aa12.84□□□□□ -0.35
MSRA-210ENST00000528246 VAMP4O75379 141 aa12.84□□□□□ -0.35
MSRA-210ENST00000528246 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
MSRA-210ENST00000528246 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
MSRA-210ENST00000528246 CDK19Q9BWU1 502 aa12.84□□□□□ -0.35
MSRA-210ENST00000528246 TRAK2O60296 914 aa12.83□□□□□ -0.36
MSRA-210ENST00000528246 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
MSRA-210ENST00000528246 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
MSRA-210ENST00000528246 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
MSRA-210ENST00000528246 PIP4K2BP78356 416 aa12.82□□□□□ -0.36
MSRA-210ENST00000528246 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
MSRA-210ENST00000528246 TECPR2O15040 1411 aa12.82□□□□□ -0.36
MSRA-210ENST00000528246 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
MSRA-210ENST00000528246 NRKQ7Z2Y5 1582 aa12.82□□□□□ -0.36
MSRA-210ENST00000528246 CPS1P31327 1500 aa12.81□□□□□ -0.36
MSRA-210ENST00000528246 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
MSRA-210ENST00000528246 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
MSRA-210ENST00000528246 PRKAR2BP31323 418 aa12.81□□□□□ -0.36
MSRA-210ENST00000528246 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
MSRA-210ENST00000528246 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
MSRA-210ENST00000528246 TOM1O60784 492 aa12.8□□□□□ -0.36
MSRA-210ENST00000528246 IL13P35225 146 aa12.8□□□□□ -0.36
MSRA-210ENST00000528246 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
MSRA-210ENST00000528246 STK26Q9P289 416 aa12.79□□□□□ -0.36
MSRA-210ENST00000528246 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
MSRA-210ENST00000528246 CLCN1P35523 988 aa12.79□□□□□ -0.36
MSRA-210ENST00000528246 KIF2CQ99661 725 aa12.79□□□□□ -0.36
MSRA-210ENST00000528246 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
MSRA-210ENST00000528246 CDC45O75419 566 aa12.78□□□□□ -0.36
MSRA-210ENST00000528246 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
MSRA-210ENST00000528246 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
MSRA-210ENST00000528246 KIAA0232Q92628 1395 aa12.78□□□□□ -0.36
MSRA-210ENST00000528246 K7ELQ4 463 aaPredicted RBP12.77□□□□□ -0.36
MSRA-210ENST00000528246 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.36
MSRA-210ENST00000528246 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.36
MSRA-210ENST00000528246 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.36
MSRA-210ENST00000528246 UBR1Q8IWV7 1749 aa12.77□□□□□ -0.37
MSRA-210ENST00000528246 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
MSRA-210ENST00000528246 NRXN3Q9Y4C0 1643 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
MSRA-210ENST00000528246 RABEP1Q15276 862 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 MBIPQ9NS73 344 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
MSRA-210ENST00000528246 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
MSRA-210ENST00000528246 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
MSRA-210ENST00000528246 TWISTNBQ3B726 338 aaPredicted RBP12.75□□□□□ -0.37
MSRA-210ENST00000528246 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
MSRA-210ENST00000528246 RPAP2Q8IXW5 612 aaPredicted RBP12.75□□□□□ -0.37
MSRA-210ENST00000528246 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
MSRA-210ENST00000528246 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
MSRA-210ENST00000528246 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
MSRA-210ENST00000528246 PTPRCP08575 1304 aa12.74□□□□□ -0.37
MSRA-210ENST00000528246 LTKP29376 864 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms