RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.06■□□□□ 0.48
CAPN1-214ENST00000528165 SIRT2Q8IXJ6 389 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 ARHGAP45Q92619 1136 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
CAPN1-214ENST00000528165 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
CAPN1-214ENST00000528165 GSPT1P15170 499 aaKnown RBP18.05■□□□□ 0.48
CAPN1-214ENST00000528165 TULP4Q9NRJ4 1543 aa18.05■□□□□ 0.48
CAPN1-214ENST00000528165 PPRC1Q5VV67 1664 aaKnown RBP18.05■□□□□ 0.48
CAPN1-214ENST00000528165 MCM5P33992 734 aa18.04■□□□□ 0.48
CAPN1-214ENST00000528165 PKP1Q13835 747 aa18.04■□□□□ 0.48
CAPN1-214ENST00000528165 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
CAPN1-214ENST00000528165 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
CAPN1-214ENST00000528165 MTERF4Q7Z6M4 381 aaKnown RBP18.04■□□□□ 0.48
CAPN1-214ENST00000528165 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
CAPN1-214ENST00000528165 RBM27Q9P2N5 1060 aaKnown RBP18.03■□□□□ 0.48
CAPN1-214ENST00000528165 CCDC39Q9UFE4 941 aa18.03■□□□□ 0.48
CAPN1-214ENST00000528165 PPLO60437 1756 aa18.03■□□□□ 0.48
CAPN1-214ENST00000528165 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 DYNC1I1O14576 645 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 ST18O60284 1047 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 GPT2Q8TD30 523 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
CAPN1-214ENST00000528165 VAMP4O75379 141 aa18.01■□□□□ 0.47
CAPN1-214ENST00000528165 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
CAPN1-214ENST00000528165 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
CAPN1-214ENST00000528165 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
CAPN1-214ENST00000528165 CHD1O14646 1710 aa18.01■□□□□ 0.47
CAPN1-214ENST00000528165 RPGRIP1LQ68CZ1 1315 aa18.01■□□□□ 0.47
CAPN1-214ENST00000528165 FCHSD2O94868 740 aa18■□□□□ 0.47
CAPN1-214ENST00000528165 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
CAPN1-214ENST00000528165 TTC22Q5TAA0 569 aa18■□□□□ 0.47
CAPN1-214ENST00000528165 ABCC4O15439 1325 aa18■□□□□ 0.47
CAPN1-214ENST00000528165 GLI2P10070 1586 aa18■□□□□ 0.47
CAPN1-214ENST00000528165 FYB1O15117 783 aa17.99■□□□□ 0.47
CAPN1-214ENST00000528165 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
CAPN1-214ENST00000528165 SYCE3A1L190 88 aa17.99■□□□□ 0.47
CAPN1-214ENST00000528165 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
CAPN1-214ENST00000528165 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
CAPN1-214ENST00000528165 PRDM4Q9UKN5 801 aa17.99■□□□□ 0.47
CAPN1-214ENST00000528165 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
CAPN1-214ENST00000528165 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
CAPN1-214ENST00000528165 TMEM63CQ9P1W3 806 aa17.98■□□□□ 0.47
CAPN1-214ENST00000528165 TSPYL6Q8N831 410 aa17.98■□□□□ 0.47
CAPN1-214ENST00000528165 TERF2IPQ9NYB0 399 aa17.98■□□□□ 0.47
CAPN1-214ENST00000528165 UHRF1BP1LA0JNW5 1464 aa17.97■□□□□ 0.47
CAPN1-214ENST00000528165 ELL2O00472 640 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-214ENST00000528165 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
CAPN1-214ENST00000528165 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
CAPN1-214ENST00000528165 ZDHHC9Q9Y397 364 aa17.96■□□□□ 0.47
CAPN1-214ENST00000528165 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-214ENST00000528165 DCTPP1Q9H773 170 aa17.96■□□□□ 0.47
CAPN1-214ENST00000528165 MBD3O95983 291 aa17.95■□□□□ 0.46
CAPN1-214ENST00000528165 GNAI1P63096 354 aa17.95■□□□□ 0.46
CAPN1-214ENST00000528165 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
CAPN1-214ENST00000528165 ARID3AQ99856 593 aa17.95■□□□□ 0.46
CAPN1-214ENST00000528165 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
CAPN1-214ENST00000528165 LRRC7Q96NW7 1537 aa17.95■□□□□ 0.46
CAPN1-214ENST00000528165 PTMAP06454 111 aaKnown RBP17.95■□□□□ 0.46
CAPN1-214ENST00000528165 SMAP1Q8IYB5 467 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-214ENST00000528165 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
CAPN1-214ENST00000528165 NPATQ14207 1427 aa17.94■□□□□ 0.46
CAPN1-214ENST00000528165 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-214ENST00000528165 NFE2L2Q16236 605 aa17.94■□□□□ 0.46
CAPN1-214ENST00000528165 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-214ENST00000528165 REC8O95072 547 aa17.94■□□□□ 0.46
CAPN1-214ENST00000528165 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-214ENST00000528165 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
CAPN1-214ENST00000528165 CFAP65Q6ZU64 1925 aaKnown RBP17.93■□□□□ 0.46
CAPN1-214ENST00000528165 IFT57Q9NWB7 429 aa17.93■□□□□ 0.46
CAPN1-214ENST00000528165 NSFL1CQ9UNZ2 370 aaKnown RBP17.93■□□□□ 0.46
CAPN1-214ENST00000528165 ABCA9Q8IUA7 1624 aa17.93■□□□□ 0.46
CAPN1-214ENST00000528165 SDSP20132 328 aa17.93■□□□□ 0.46
CAPN1-214ENST00000528165 CHAMP1Q96JM3 812 aa17.93■□□□□ 0.46
CAPN1-214ENST00000528165 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
CAPN1-214ENST00000528165 KIAA2012Q0VF49 1180 aa17.92■□□□□ 0.46
CAPN1-214ENST00000528165 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-214ENST00000528165 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-214ENST00000528165 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
CAPN1-214ENST00000528165 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
CAPN1-214ENST00000528165 ZFYVE9O95405 1425 aa17.91■□□□□ 0.46
CAPN1-214ENST00000528165 STK26Q9P289 416 aa17.91■□□□□ 0.46
CAPN1-214ENST00000528165 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-214ENST00000528165 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-214ENST00000528165 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
CAPN1-214ENST00000528165 TSPY26PQ9H489 355 aa17.9■□□□□ 0.46
CAPN1-214ENST00000528165 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
CAPN1-214ENST00000528165 HMOX1P09601 288 aa17.9■□□□□ 0.46
CAPN1-214ENST00000528165 DNTTIP2Q5QJE6 756 aaKnown RBP17.9■□□□□ 0.46
CAPN1-214ENST00000528165 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.46
CAPN1-214ENST00000528165 GGT6Q6P531 493 aa17.89■□□□□ 0.45
CAPN1-214ENST00000528165 SYAP1Q96A49 352 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-214ENST00000528165 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
CAPN1-214ENST00000528165 ERC2O15083 957 aa17.88■□□□□ 0.45
CAPN1-214ENST00000528165 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
CAPN1-214ENST00000528165 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
CAPN1-214ENST00000528165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■□□□□ 9.3
CAPN1-214ENST00000528165 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms