RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
RBM39-243ENST00000528062 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
RBM39-243ENST00000528062 PHRF1Q9P1Y6 1649 aaKnown RBP16.93■□□□□ 0.3
RBM39-243ENST00000528062 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
RBM39-243ENST00000528062 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
RBM39-243ENST00000528062 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
RBM39-243ENST00000528062 NEFMP07197 916 aa16.91■□□□□ 0.3
RBM39-243ENST00000528062 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
RBM39-243ENST00000528062 USP31Q70CQ4 1352 aa16.91■□□□□ 0.3
RBM39-243ENST00000528062 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
RBM39-243ENST00000528062 SLIT3O75094 1523 aa16.9■□□□□ 0.3
RBM39-243ENST00000528062 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
RBM39-243ENST00000528062 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
RBM39-243ENST00000528062 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
RBM39-243ENST00000528062 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
RBM39-243ENST00000528062 NSD2O96028 1365 aa16.89■□□□□ 0.29
RBM39-243ENST00000528062 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
RBM39-243ENST00000528062 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.29
RBM39-243ENST00000528062 NFAT5O94916 1531 aa16.88■□□□□ 0.29
RBM39-243ENST00000528062 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
RBM39-243ENST00000528062 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
RBM39-243ENST00000528062 USP19O94966 1318 aa16.87■□□□□ 0.29
RBM39-243ENST00000528062 FBLN1P23142 703 aa16.87■□□□□ 0.29
RBM39-243ENST00000528062 HSPA1LP34931 641 aa16.87■□□□□ 0.29
RBM39-243ENST00000528062 TRMT2AQ8IZ69 625 aaKnown RBP16.87■□□□□ 0.29
RBM39-243ENST00000528062 LTN1O94822 1766 aa16.86■□□□□ 0.29
RBM39-243ENST00000528062 NLRP6P59044 892 aa16.86■□□□□ 0.29
RBM39-243ENST00000528062 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
RBM39-243ENST00000528062 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
RBM39-243ENST00000528062 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
RBM39-243ENST00000528062 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
RBM39-243ENST00000528062 APAF1O14727 1248 aa16.85■□□□□ 0.29
RBM39-243ENST00000528062 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
RBM39-243ENST00000528062 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
RBM39-243ENST00000528062 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
RBM39-243ENST00000528062 PPM1GO15355 546 aaPredicted RBP16.84■□□□□ 0.29
RBM39-243ENST00000528062 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
RBM39-243ENST00000528062 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
RBM39-243ENST00000528062 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
RBM39-243ENST00000528062 COG3Q96JB2 828 aa16.83■□□□□ 0.28
RBM39-243ENST00000528062 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
RBM39-243ENST00000528062 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.82■□□□□ 0.28
RBM39-243ENST00000528062 BCAR3O75815 825 aa16.81■□□□□ 0.28
RBM39-243ENST00000528062 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
RBM39-243ENST00000528062 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
RBM39-243ENST00000528062 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
RBM39-243ENST00000528062 FBXO41Q8TF61 875 aa16.81■□□□□ 0.28
RBM39-243ENST00000528062 COL18A1P39060 1754 aa16.8■□□□□ 0.28
RBM39-243ENST00000528062 SOX12O15370 315 aa16.8■□□□□ 0.28
RBM39-243ENST00000528062 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
RBM39-243ENST00000528062 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
RBM39-243ENST00000528062 GCP02774 474 aa16.79■□□□□ 0.28
RBM39-243ENST00000528062 RGS3P49796 1198 aa16.79■□□□□ 0.28
RBM39-243ENST00000528062 JCADQ9P266 1359 aa16.78■□□□□ 0.28
RBM39-243ENST00000528062 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
RBM39-243ENST00000528062 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
RBM39-243ENST00000528062 LRP6O75581 1613 aa16.77■□□□□ 0.28
RBM39-243ENST00000528062 E9PSI1 815 aa16.76■□□□□ 0.27
RBM39-243ENST00000528062 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
RBM39-243ENST00000528062 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
RBM39-243ENST00000528062 LMO7Q8WWI1 1683 aa16.76■□□□□ 0.27
RBM39-243ENST00000528062 MAP3K19Q56UN5 1328 aa16.76■□□□□ 0.27
RBM39-243ENST00000528062 NFKBIBQ15653 356 aa16.75■□□□□ 0.27
RBM39-243ENST00000528062 IGHDP01880 384 aa16.75■□□□□ 0.27
RBM39-243ENST00000528062 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
RBM39-243ENST00000528062 KIAA0232Q92628 1395 aa16.74■□□□□ 0.27
RBM39-243ENST00000528062 CPDO75976 1380 aa16.74■□□□□ 0.27
RBM39-243ENST00000528062 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
RBM39-243ENST00000528062 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
RBM39-243ENST00000528062 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
RBM39-243ENST00000528062 PLCH1Q4KWH8 1693 aa16.73■□□□□ 0.27
RBM39-243ENST00000528062 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
RBM39-243ENST00000528062 KCNA4P22459 653 aa16.72■□□□□ 0.27
RBM39-243ENST00000528062 MTHFSP49914 203 aa16.72■□□□□ 0.27
RBM39-243ENST00000528062 RGPD2P0DJD1 1756 aa16.71■□□□□ 0.27
RBM39-243ENST00000528062 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
RBM39-243ENST00000528062 COL14A1Q05707 1796 aaKnown RBP16.71■□□□□ 0.27
RBM39-243ENST00000528062 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
RBM39-243ENST00000528062 ABCC6O95255 1503 aa16.7■□□□□ 0.26
RBM39-243ENST00000528062 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
RBM39-243ENST00000528062 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
RBM39-243ENST00000528062 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
RBM39-243ENST00000528062 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
RBM39-243ENST00000528062 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
RBM39-243ENST00000528062 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
RBM39-243ENST00000528062 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
RBM39-243ENST00000528062 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
RBM39-243ENST00000528062 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 HOXC9P31274 260 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 FLT4P35916 1363 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
RBM39-243ENST00000528062 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
RBM39-243ENST00000528062 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
RBM39-243ENST00000528062 GSE1Q14687 1217 aa16.67■□□□□ 0.26
RBM39-243ENST00000528062 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
RBM39-243ENST00000528062 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
RBM39-243ENST00000528062 KIF24Q5T7B8 1368 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms