RNA–Protein interactions for RNA: ENST00000527662.5

CSRP1-211, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 4,208 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-211ENST00000527662 DDX19BQ9UMR2 479 aa9.92□□□□□ -0.82
CSRP1-211ENST00000527662 ARHGAP31Q2M1Z3 1444 aa9.92□□□□□ -0.82
CSRP1-211ENST00000527662 HSPA1LP34931 641 aa9.92□□□□□ -0.82
CSRP1-211ENST00000527662 FKBP5Q13451 457 aaPredicted RBP9.92□□□□□ -0.82
CSRP1-211ENST00000527662 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
CSRP1-211ENST00000527662 BICDL1Q6ZP65 573 aa9.92□□□□□ -0.82
CSRP1-211ENST00000527662 HSP90AB1P08238 724 aaKnown RBP9.91□□□□□ -0.82
CSRP1-211ENST00000527662 RIMS1Q86UR5 1692 aaKnown RBP9.91□□□□□ -0.82
CSRP1-211ENST00000527662 DDB1Q16531 1140 aa9.91□□□□□ -0.82
CSRP1-211ENST00000527662 ARHGEF40Q8TER5 1519 aa9.91□□□□□ -0.82
CSRP1-211ENST00000527662 SLC39A6Q13433 755 aa9.91□□□□□ -0.82
CSRP1-211ENST00000527662 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
CSRP1-211ENST00000527662 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
CSRP1-211ENST00000527662 KIF16BQ96L93 1317 aa9.91□□□□□ -0.82
CSRP1-211ENST00000527662 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
CSRP1-211ENST00000527662 ANKRD36BQ8N2N9 1353 aa9.9□□□□□ -0.82
CSRP1-211ENST00000527662 NPC1L1Q9UHC9 1359 aa9.9□□□□□ -0.82
CSRP1-211ENST00000527662 PER1O15534 1290 aaPredicted RBP9.9□□□□□ -0.82
CSRP1-211ENST00000527662 CEP152O94986 1710 aa9.9□□□□□ -0.82
CSRP1-211ENST00000527662 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.82
CSRP1-211ENST00000527662 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.82
CSRP1-211ENST00000527662 PLXNC1O60486 1568 aa9.9□□□□□ -0.83
CSRP1-211ENST00000527662 PIK3C2GO75747 1445 aa9.9□□□□□ -0.83
CSRP1-211ENST00000527662 BTBD11A6QL63 1104 aa9.9□□□□□ -0.83
CSRP1-211ENST00000527662 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.83
CSRP1-211ENST00000527662 EYA1Q99502 592 aa9.9□□□□□ -0.83
CSRP1-211ENST00000527662 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
CSRP1-211ENST00000527662 LARP1Q6PKG0 1096 aaKnown RBP9.89□□□□□ -0.83
CSRP1-211ENST00000527662 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
CSRP1-211ENST00000527662 TMOD3Q9NYL9 352 aa9.89□□□□□ -0.83
CSRP1-211ENST00000527662 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
CSRP1-211ENST00000527662 NSD2O96028 1365 aa9.89□□□□□ -0.83
CSRP1-211ENST00000527662 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 ANXA1P04083 346 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 TMPOP42166 694 aaKnown RBP9.88□□□□□ -0.83
CSRP1-211ENST00000527662 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
CSRP1-211ENST00000527662 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 TRPM2O94759 1503 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 HOXC9P31274 260 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
CSRP1-211ENST00000527662 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
CSRP1-211ENST00000527662 GNAT3A8MTJ3 354 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 FCHSD2O94868 740 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 PHF14O94880 888 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 DUSP27Q5VZP5 1158 aa9.88□□□□□ -0.83
CSRP1-211ENST00000527662 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
CSRP1-211ENST00000527662 GNAI1P63096 354 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 TRIM44Q96DX7 344 aaPredicted RBP9.87□□□□□ -0.83
CSRP1-211ENST00000527662 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 GSE1Q14687 1217 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 HDGFL1Q5TGJ6 251 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 NBPF6Q5VWK0 638 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 NBPF4Q96M43 638 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 GBP4Q96PP9 640 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
CSRP1-211ENST00000527662 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 CAMSAP1Q5T5Y3 1602 aa9.87□□□□□ -0.83
CSRP1-211ENST00000527662 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
CSRP1-211ENST00000527662 KIAA0232Q92628 1395 aa9.86□□□□□ -0.83
CSRP1-211ENST00000527662 CLTCL1P53675 1640 aa9.86□□□□□ -0.83
CSRP1-211ENST00000527662 C9orf78Q9NZ63 289 aaPredicted RBP9.86□□□□□ -0.83
CSRP1-211ENST00000527662 RNF17Q9BXT8 1623 aaKnown RBP9.86□□□□□ -0.83
CSRP1-211ENST00000527662 IL2RBP14784 551 aa9.86□□□□□ -0.83
CSRP1-211ENST00000527662 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.86□□□□□ -0.83
CSRP1-211ENST00000527662 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 BLMP54132 1417 aaPredicted RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 NFE2L2Q16236 605 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 FRMPD1Q5SYB0 1578 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 PANK1Q8TE04 598 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 PPRC1Q5VV67 1664 aaKnown RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 MFAP1P55081 439 aaKnown RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 KCNQ4P56696 695 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
CSRP1-211ENST00000527662 IP6K1Q92551 441 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 TET3O43151 1660 aa9.85□□□□□ -0.83
CSRP1-211ENST00000527662 HMMRO75330 724 aa9.84□□□□□ -0.83
CSRP1-211ENST00000527662 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
CSRP1-211ENST00000527662 API5Q9BZZ5 524 aaKnown RBP9.84□□□□□ -0.83
CSRP1-211ENST00000527662 AGLP35573 1532 aa9.84□□□□□ -0.83
CSRP1-211ENST00000527662 SETD1BQ9UPS6 1966 aaKnown RBP9.84□□□□□ -0.83
CSRP1-211ENST00000527662 NEXNQ0ZGT2 675 aa9.84□□□□□ -0.83
CSRP1-211ENST00000527662 BCAR3O75815 825 aa9.84□□□□□ -0.83
CSRP1-211ENST00000527662 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
CSRP1-211ENST00000527662 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
CSRP1-211ENST00000527662 MCCP23508 829 aa9.83□□□□□ -0.84
CSRP1-211ENST00000527662 KRT24Q2M2I5 525 aa9.83□□□□□ -0.84
CSRP1-211ENST00000527662 FRAT2O75474 233 aaPredicted RBP9.83□□□□□ -0.84
CSRP1-211ENST00000527662 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
CSRP1-211ENST00000527662 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
CSRP1-211ENST00000527662 G3V3G9 751 aa9.82□□□□□ -0.84
CSRP1-211ENST00000527662 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
CSRP1-211ENST00000527662 NFKBIBQ15653 356 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms