RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
VPS26B-204ENST00000527586 LRRC4BQ9NT99 713 aa10.94□□□□□ -0.66
VPS26B-204ENST00000527586 TFCP2L1Q9NZI6 479 aa10.94□□□□□ -0.66
VPS26B-204ENST00000527586 COL24A1Q17RW2 1714 aa10.93□□□□□ -0.66
VPS26B-204ENST00000527586 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
VPS26B-204ENST00000527586 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
VPS26B-204ENST00000527586 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
VPS26B-204ENST00000527586 IGSF1Q8N6C5 1336 aa10.91□□□□□ -0.66
VPS26B-204ENST00000527586 MSH5O43196 834 aa10.91□□□□□ -0.66
VPS26B-204ENST00000527586 LBX1P52954 281 aa10.91□□□□□ -0.66
VPS26B-204ENST00000527586 MSL1Q68DK7 614 aa10.91□□□□□ -0.66
VPS26B-204ENST00000527586 AIDAQ96BJ3 306 aa10.91□□□□□ -0.66
VPS26B-204ENST00000527586 RGPD8O14715 1765 aaPredicted RBP10.9□□□□□ -0.66
VPS26B-204ENST00000527586 CRYBG1Q9Y4K1 1723 aa10.9□□□□□ -0.66
VPS26B-204ENST00000527586 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
VPS26B-204ENST00000527586 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
VPS26B-204ENST00000527586 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
VPS26B-204ENST00000527586 CLTCL1P53675 1640 aa10.9□□□□□ -0.66
VPS26B-204ENST00000527586 ABCC11Q96J66 1382 aa10.9□□□□□ -0.67
VPS26B-204ENST00000527586 PDE4DIPQ5VU43 2346 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 RRAGCQ9HB90 399 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 CRB1P82279 1406 aa10.89□□□□□ -0.67
VPS26B-204ENST00000527586 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
VPS26B-204ENST00000527586 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
VPS26B-204ENST00000527586 NUP155O75694 1391 aa10.88□□□□□ -0.67
VPS26B-204ENST00000527586 ANKRD30BQ9BXX2 1392 aa10.88□□□□□ -0.67
VPS26B-204ENST00000527586 BRD4O60885 1362 aaPredicted RBP10.87□□□□□ -0.67
VPS26B-204ENST00000527586 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
VPS26B-204ENST00000527586 COL5A2P05997 1499 aaPredicted RBP10.86□□□□□ -0.67
VPS26B-204ENST00000527586 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
VPS26B-204ENST00000527586 KDM2BQ8NHM5 1336 aa10.85□□□□□ -0.67
VPS26B-204ENST00000527586 ANKARQ7Z5J8 1434 aa10.85□□□□□ -0.67
VPS26B-204ENST00000527586 TOM1L2Q6ZVM7 507 aa10.85□□□□□ -0.67
VPS26B-204ENST00000527586 CDCA7Q9BWT1 371 aaPredicted RBP10.85□□□□□ -0.67
VPS26B-204ENST00000527586 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
VPS26B-204ENST00000527586 EXOC5O00471 708 aa10.84□□□□□ -0.67
VPS26B-204ENST00000527586 SAFB2Q14151 953 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS26B-204ENST00000527586 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
VPS26B-204ENST00000527586 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
VPS26B-204ENST00000527586 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
VPS26B-204ENST00000527586 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
VPS26B-204ENST00000527586 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
VPS26B-204ENST00000527586 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
VPS26B-204ENST00000527586 CPDO75976 1380 aa10.83□□□□□ -0.68
VPS26B-204ENST00000527586 KCNQ4P56696 695 aa10.83□□□□□ -0.68
VPS26B-204ENST00000527586 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
VPS26B-204ENST00000527586 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
VPS26B-204ENST00000527586 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
VPS26B-204ENST00000527586 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
VPS26B-204ENST00000527586 LMO7Q8WWI1 1683 aa10.82□□□□□ -0.68
VPS26B-204ENST00000527586 QSER1Q2KHR3 1735 aa10.82□□□□□ -0.68
VPS26B-204ENST00000527586 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
VPS26B-204ENST00000527586 USP6P35125 1406 aa10.82□□□□□ -0.68
VPS26B-204ENST00000527586 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
VPS26B-204ENST00000527586 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
VPS26B-204ENST00000527586 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
VPS26B-204ENST00000527586 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
VPS26B-204ENST00000527586 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
VPS26B-204ENST00000527586 ADGRF5Q8IZF2 1346 aa10.8□□□□□ -0.68
VPS26B-204ENST00000527586 YTHDC2Q9H6S0 1430 aaKnown RBP10.79□□□□□ -0.68
VPS26B-204ENST00000527586 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
VPS26B-204ENST00000527586 PRR36Q9H6K5 1346 aa10.79□□□□□ -0.68
VPS26B-204ENST00000527586 AKAP12Q02952 1782 aa10.78□□□□□ -0.68
VPS26B-204ENST00000527586 DLL1O00548 723 aa10.78□□□□□ -0.68
VPS26B-204ENST00000527586 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
VPS26B-204ENST00000527586 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
VPS26B-204ENST00000527586 CNTNAP1P78357 1384 aa10.77□□□□□ -0.69
VPS26B-204ENST00000527586 KNDC1Q76NI1 1749 aa10.76□□□□□ -0.69
VPS26B-204ENST00000527586 GCP02774 474 aa10.76□□□□□ -0.69
VPS26B-204ENST00000527586 VEGFBP49765 207 aa10.76□□□□□ -0.69
VPS26B-204ENST00000527586 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
VPS26B-204ENST00000527586 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
VPS26B-204ENST00000527586 WDR17Q8IZU2 1322 aa10.75□□□□□ -0.69
VPS26B-204ENST00000527586 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
VPS26B-204ENST00000527586 VEGFAP15692 232 aaPredicted RBP10.74□□□□□ -0.69
VPS26B-204ENST00000527586 RNF181Q9P0P0 153 aa10.74□□□□□ -0.69
VPS26B-204ENST00000527586 POGKQ9P215 609 aa10.74□□□□□ -0.69
VPS26B-204ENST00000527586 KIF1BO60333 1816 aa10.74□□□□□ -0.69
VPS26B-204ENST00000527586 BTAF1O14981 1849 aa10.73□□□□□ -0.69
VPS26B-204ENST00000527586 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
VPS26B-204ENST00000527586 CARD10Q9BWT7 1032 aa10.73□□□□□ -0.69
VPS26B-204ENST00000527586 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
VPS26B-204ENST00000527586 TRPM1Q7Z4N2 1603 aa10.72□□□□□ -0.69
VPS26B-204ENST00000527586 FCHSD2O94868 740 aa10.71□□□□□ -0.69
VPS26B-204ENST00000527586 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
VPS26B-204ENST00000527586 MCOLN1Q9GZU1 580 aa10.71□□□□□ -0.69
VPS26B-204ENST00000527586 CCNL1Q9UK58 526 aaPredicted RBP10.71□□□□□ -0.69
VPS26B-204ENST00000527586 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
VPS26B-204ENST00000527586 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
VPS26B-204ENST00000527586 A0A0G2JLW4 131 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 SMIM5Q71RC9 77 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 FLAD1Q8NFF5 587 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 PPLO60437 1756 aa10.7□□□□□ -0.7
VPS26B-204ENST00000527586 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-204ENST00000527586 MAP2K1Q02750 393 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms