RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MORC1Q86VD1 984 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.03
CTNND1-216ENST00000527467 USP21Q9UK80 565 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 RUSC2Q8N2Y8 1516 aa8.65□□□□□ -1.03
CTNND1-216ENST00000527467 CPLX1O14810 134 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 SSR1P43307 286 aaKnown RBP8.64□□□□□ -1.03
CTNND1-216ENST00000527467 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 RTEL1-TNFRSF6BF6WH68 1400 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 PDE4AP27815 886 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
CTNND1-216ENST00000527467 CDCA7Q9BWT1 371 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 PTPRMP28827 1452 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 ZKSCAN1P17029 563 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 TRIM5Q9C035 493 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 GLI2P10070 1586 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 TNNT1P13805 278 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 GBP2P32456 591 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 ABCA8O94911 1581 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 WDHD1O75717 1129 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 IBSPP21815 317 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
CTNND1-216ENST00000527467 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
CTNND1-216ENST00000527467 SETSIPP0DME0 302 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 FILIP1LQ4L180 1135 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 NPATQ14207 1427 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 RBM6P78332 1123 aaKnown RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 KDM4FA0A1W2PPD8 638 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 REC8O95072 547 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 CCDC102AQ96A19 550 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 COG3Q96JB2 828 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-216ENST00000527467 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
CTNND1-216ENST00000527467 TXLNAP40222 546 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 RUFY2Q8WXA3 655 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 JCADQ9P266 1359 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 TMCO5BA8MYB1 307 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 IRX3P78415 501 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-216ENST00000527467 MICALCLQ6ZW33 695 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 FAM114A1Q8IWE2 563 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 TBX22Q9Y458 520 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 CENPQQ7L2Z9 268 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-216ENST00000527467 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-216ENST00000527467 SAFBQ15424 915 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-216ENST00000527467 RILPL2Q969X0 211 aa8.61□□□□□ -1.03
CTNND1-216ENST00000527467 UQCRHLA0A096LP55 91 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 UQCRHP07919 91 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 SYCP1Q15431 976 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 ABTB2Q8N961 1025 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 DDX23Q9BUQ8 820 aaKnown RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 ZNHIT6Q9NWK9 470 aaKnown RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 LRRC9Q6ZRR7 1453 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 SMC3Q9UQE7 1217 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 ARAP3Q8WWN8 1544 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 SMC2O95347 1197 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 FAM193AP78312 1265 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 TMCO3Q6UWJ1 677 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 SDF4Q9BRK5 362 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
CTNND1-216ENST00000527467 CGNQ9P2M7 1197 aaKnown RBP8.6□□□□□ -1.03
CTNND1-216ENST00000527467 SOCS7O14512 581 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
CTNND1-216ENST00000527467 FEZ1Q99689 392 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 PAIP2Q9BPZ3 127 aaKnown RBP8.59□□□□□ -1.03
CTNND1-216ENST00000527467 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 ATAD2Q6PL18 1390 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 ZNF692Q9BU19 519 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-216ENST00000527467 PTPRTO14522 1441 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 GTF2A1P52655 376 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-216ENST00000527467 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
CTNND1-216ENST00000527467 KTN1Q86UP2 1357 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms