RNA–Protein interactions for RNA: ENST00000527026.1

PTPRJ-204, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 4

Gene PTPRJ, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-204ENST00000527026 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
PTPRJ-204ENST00000527026 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
PTPRJ-204ENST00000527026 FOXO3O43524 673 aa12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 JCADQ9P266 1359 aa12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
PTPRJ-204ENST00000527026 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
PTPRJ-204ENST00000527026 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
PTPRJ-204ENST00000527026 ERBB3P21860 1342 aa12.76□□□□□ -0.37
PTPRJ-204ENST00000527026 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
PTPRJ-204ENST00000527026 TECPR2O15040 1411 aa12.75□□□□□ -0.37
PTPRJ-204ENST00000527026 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
PTPRJ-204ENST00000527026 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
PTPRJ-204ENST00000527026 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
PTPRJ-204ENST00000527026 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
PTPRJ-204ENST00000527026 PRAG1Q86YV5 1406 aa12.74□□□□□ -0.37
PTPRJ-204ENST00000527026 PDE4AP27815 886 aa12.74□□□□□ -0.37
PTPRJ-204ENST00000527026 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
PTPRJ-204ENST00000527026 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
PTPRJ-204ENST00000527026 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
PTPRJ-204ENST00000527026 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
PTPRJ-204ENST00000527026 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
PTPRJ-204ENST00000527026 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
PTPRJ-204ENST00000527026 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
PTPRJ-204ENST00000527026 SPATA31A6Q5VVP1 1343 aa12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 LAMC1P11047 1609 aa12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 WASLO00401 505 aaPredicted RBP12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 LARP6Q9BRS8 491 aaKnown RBP12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
PTPRJ-204ENST00000527026 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 KIF3CO14782 793 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 PSME1Q06323 249 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 MFSD10Q14728 455 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
PTPRJ-204ENST00000527026 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
PTPRJ-204ENST00000527026 C2orf72A6NCS6 295 aa12.68□□□□□ -0.38
PTPRJ-204ENST00000527026 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
PTPRJ-204ENST00000527026 WDR70Q9NW82 654 aa12.68□□□□□ -0.38
PTPRJ-204ENST00000527026 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
PTPRJ-204ENST00000527026 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 SOCS7O14512 581 aa12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
PTPRJ-204ENST00000527026 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
PTPRJ-204ENST00000527026 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
PTPRJ-204ENST00000527026 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
PTPRJ-204ENST00000527026 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
PTPRJ-204ENST00000527026 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 CDC42BPGQ6DT37 1551 aa12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 C8orf37Q96NL8 207 aa12.65□□□□□ -0.38
PTPRJ-204ENST00000527026 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
PTPRJ-204ENST00000527026 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 FOXK1P85037 733 aa12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 DSG2Q14126 1118 aa12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 ZNF772Q68DY9 489 aaPredicted RBP12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
PTPRJ-204ENST00000527026 AFF2P51816 1311 aa12.62□□□□□ -0.39
PTPRJ-204ENST00000527026 LRP6O75581 1613 aa12.62□□□□□ -0.39
PTPRJ-204ENST00000527026 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
PTPRJ-204ENST00000527026 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
PTPRJ-204ENST00000527026 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
PTPRJ-204ENST00000527026 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
PTPRJ-204ENST00000527026 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
PTPRJ-204ENST00000527026 PXDNQ92626 1479 aa12.6□□□□□ -0.39
PTPRJ-204ENST00000527026 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
PTPRJ-204ENST00000527026 RXRBP28702 533 aa12.59□□□□□ -0.39
PTPRJ-204ENST00000527026 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
PTPRJ-204ENST00000527026 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
PTPRJ-204ENST00000527026 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 E2F4Q16254 413 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 USP21Q9UK80 565 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 ACEP12821 1306 aa12.58□□□□□ -0.4
PTPRJ-204ENST00000527026 TRPM1Q7Z4N2 1603 aa12.57□□□□□ -0.4
PTPRJ-204ENST00000527026 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
PTPRJ-204ENST00000527026 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
PTPRJ-204ENST00000527026 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 CCER1Q8TC90 406 aaPredicted RBP12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
PTPRJ-204ENST00000527026 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms