RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 PSME1Q06323 249 aa10.92□□□□□ -0.66
CTNND1-215ENST00000526938 TMEM131LA2VDJ0 1609 aa10.92□□□□□ -0.66
CTNND1-215ENST00000526938 C8orf58Q8NAV2 365 aa10.92□□□□□ -0.66
CTNND1-215ENST00000526938 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
CTNND1-215ENST00000526938 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
CTNND1-215ENST00000526938 USHBP1Q8N6Y0 703 aa10.91□□□□□ -0.66
CTNND1-215ENST00000526938 ARHGEF40Q8TER5 1519 aa10.91□□□□□ -0.66
CTNND1-215ENST00000526938 MFAP1P55081 439 aaKnown RBP10.9□□□□□ -0.66
CTNND1-215ENST00000526938 ANKRD45Q5TZF3 282 aa10.9□□□□□ -0.66
CTNND1-215ENST00000526938 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
CTNND1-215ENST00000526938 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.67
CTNND1-215ENST00000526938 C8orf34Q49A92 452 aa10.89□□□□□ -0.67
CTNND1-215ENST00000526938 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
CTNND1-215ENST00000526938 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
CTNND1-215ENST00000526938 MAP3K19Q56UN5 1328 aa10.89□□□□□ -0.67
CTNND1-215ENST00000526938 SEC24BO95487 1268 aa10.89□□□□□ -0.67
CTNND1-215ENST00000526938 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
CTNND1-215ENST00000526938 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
CTNND1-215ENST00000526938 VAMP4O75379 141 aa10.88□□□□□ -0.67
CTNND1-215ENST00000526938 CT47B1P0C2W7 299 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-215ENST00000526938 CD163L1Q9NR16 1453 aa10.88□□□□□ -0.67
CTNND1-215ENST00000526938 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
CTNND1-215ENST00000526938 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
CTNND1-215ENST00000526938 AGLP35573 1532 aa10.87□□□□□ -0.67
CTNND1-215ENST00000526938 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
CTNND1-215ENST00000526938 ARHGEF28Q8N1W1 1705 aaKnown RBP10.86□□□□□ -0.67
CTNND1-215ENST00000526938 PLEKHG3A1L390 1219 aa10.86□□□□□ -0.67
CTNND1-215ENST00000526938 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
CTNND1-215ENST00000526938 IL16Q14005 1332 aa10.86□□□□□ -0.67
CTNND1-215ENST00000526938 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
CTNND1-215ENST00000526938 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
CTNND1-215ENST00000526938 SIRT1Q96EB6 747 aa10.85□□□□□ -0.67
CTNND1-215ENST00000526938 EYA1Q99502 592 aa10.85□□□□□ -0.67
CTNND1-215ENST00000526938 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
CTNND1-215ENST00000526938 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-215ENST00000526938 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
CTNND1-215ENST00000526938 F6X3S4 739 aa10.84□□□□□ -0.67
CTNND1-215ENST00000526938 DEKP35659 375 aaKnown RBP10.84□□□□□ -0.67
CTNND1-215ENST00000526938 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
CTNND1-215ENST00000526938 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
CTNND1-215ENST00000526938 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
CTNND1-215ENST00000526938 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
CTNND1-215ENST00000526938 PLEKHG1Q9ULL1 1385 aa10.84□□□□□ -0.67
CTNND1-215ENST00000526938 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.67
CTNND1-215ENST00000526938 STK31Q9BXU1 1019 aa10.83□□□□□ -0.67
CTNND1-215ENST00000526938 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.67
CTNND1-215ENST00000526938 ADAMTS13Q76LX8 1427 aa10.83□□□□□ -0.68
CTNND1-215ENST00000526938 ORAI2Q96SN7 254 aa10.83□□□□□ -0.68
CTNND1-215ENST00000526938 ATP7BP35670 1465 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 BECN1Q14457 450 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
CTNND1-215ENST00000526938 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 CPS1P31327 1500 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 ZC3H6P61129 1189 aaKnown RBP10.82□□□□□ -0.68
CTNND1-215ENST00000526938 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-215ENST00000526938 AAMPQ13685 434 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 ARXQ96QS3 562 aa10.82□□□□□ -0.68
CTNND1-215ENST00000526938 CHMP4BQ9H444 224 aaKnown RBP10.82□□□□□ -0.68
CTNND1-215ENST00000526938 FAM135BQ49AJ0 1406 aa10.81□□□□□ -0.68
CTNND1-215ENST00000526938 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
CTNND1-215ENST00000526938 NLRP1Q9C000 1473 aa10.81□□□□□ -0.68
CTNND1-215ENST00000526938 GAS2L2Q8NHY3 880 aa10.81□□□□□ -0.68
CTNND1-215ENST00000526938 HSP90AA1P07900 732 aaKnown RBP10.8□□□□□ -0.68
CTNND1-215ENST00000526938 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-215ENST00000526938 LRRC59Q96AG4 307 aaKnown RBP10.8□□□□□ -0.68
CTNND1-215ENST00000526938 IQSEC2Q5JU85 1478 aa10.8□□□□□ -0.68
CTNND1-215ENST00000526938 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
CTNND1-215ENST00000526938 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 ZBTB7BO15156 539 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-215ENST00000526938 USP6P35125 1406 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 DDX17Q92841 729 aaKnown RBP10.79□□□□□ -0.68
CTNND1-215ENST00000526938 TTC21AQ8NDW8 1320 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 HOXC9P31274 260 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 G2E3Q7L622 706 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
CTNND1-215ENST00000526938 TEFQ10587 303 aa10.78□□□□□ -0.68
CTNND1-215ENST00000526938 GNAT3A8MTJ3 354 aa10.78□□□□□ -0.68
CTNND1-215ENST00000526938 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
CTNND1-215ENST00000526938 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
CTNND1-215ENST00000526938 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-215ENST00000526938 HSPA2P54652 639 aa10.78□□□□□ -0.68
CTNND1-215ENST00000526938 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.68
CTNND1-215ENST00000526938 MPRIPQ6WCQ1 1025 aa10.77□□□□□ -0.68
CTNND1-215ENST00000526938 MEIS3Q99687 375 aa10.77□□□□□ -0.68
CTNND1-215ENST00000526938 C22orf23Q9BZE7 217 aa10.77□□□□□ -0.68
CTNND1-215ENST00000526938 CHL1O00533 1208 aa10.77□□□□□ -0.69
CTNND1-215ENST00000526938 ANXA1P04083 346 aa10.77□□□□□ -0.69
CTNND1-215ENST00000526938 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
CTNND1-215ENST00000526938 FLT4P35916 1363 aa10.77□□□□□ -0.69
CTNND1-215ENST00000526938 NLRP2Q9NX02 1062 aa10.77□□□□□ -0.69
CTNND1-215ENST00000526938 COL3A1P02461 1466 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-215ENST00000526938 C16orf71Q8IYS4 520 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-215ENST00000526938 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
CTNND1-215ENST00000526938 MED14O60244 1454 aa10.76□□□□□ -0.69
CTNND1-215ENST00000526938 ATF3P18847 181 aa10.76□□□□□ -0.69
CTNND1-215ENST00000526938 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
CTNND1-215ENST00000526938 ZNF530Q6P9A1 599 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-215ENST00000526938 DLC1Q96QB1 1528 aa10.75□□□□□ -0.69
CTNND1-215ENST00000526938 SMC5Q8IY18 1101 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms