RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 PRR20DP86480 221 aa8.11□□□□□ -1.11
CTR9-203ENST00000526874 PRR20BP86481 221 aa8.11□□□□□ -1.11
CTR9-203ENST00000526874 PRR20AP86496 221 aa8.11□□□□□ -1.11
CTR9-203ENST00000526874 TRMT44Q8IYL2 757 aaKnown RBP8.11□□□□□ -1.11
CTR9-203ENST00000526874 SNIP1Q8TAD8 396 aaKnown RBP8.11□□□□□ -1.11
CTR9-203ENST00000526874 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
CTR9-203ENST00000526874 SMPD1P17405 629 aa8.1□□□□□ -1.11
CTR9-203ENST00000526874 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
CTR9-203ENST00000526874 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
CTR9-203ENST00000526874 GIGYF1O75420 1035 aaPredicted RBP8.09□□□□□ -1.11
CTR9-203ENST00000526874 NR3C2P08235 984 aa8.09□□□□□ -1.11
CTR9-203ENST00000526874 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTR9-203ENST00000526874 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
CTR9-203ENST00000526874 ZBTB7CA1YPR0 619 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 ADH1CP00326 375 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 GRM5P41594 1212 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 NNTQ13423 1086 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 INTS6LQ5JSJ4 861 aaKnown RBP8.08□□□□□ -1.12
CTR9-203ENST00000526874 GLMNQ92990 594 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 CDK15Q96Q40 435 aa8.08□□□□□ -1.12
CTR9-203ENST00000526874 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
CTR9-203ENST00000526874 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
CTR9-203ENST00000526874 HPS1Q92902 700 aa8.07□□□□□ -1.12
CTR9-203ENST00000526874 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
CTR9-203ENST00000526874 ALG2Q9H553 416 aa8.06□□□□□ -1.12
CTR9-203ENST00000526874 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
CTR9-203ENST00000526874 MAP4K5Q9Y4K4 846 aa8.06□□□□□ -1.12
CTR9-203ENST00000526874 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
CTR9-203ENST00000526874 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
CTR9-203ENST00000526874 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
CTR9-203ENST00000526874 TSGA10IPQ3SY00 556 aa8.04□□□□□ -1.12
CTR9-203ENST00000526874 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
CTR9-203ENST00000526874 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CTR9-203ENST00000526874 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
CTR9-203ENST00000526874 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
CTR9-203ENST00000526874 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
CTR9-203ENST00000526874 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
CTR9-203ENST00000526874 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
CTR9-203ENST00000526874 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
CTR9-203ENST00000526874 ESPNB1AK53 854 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 SOX11P35716 441 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
CTR9-203ENST00000526874 NR5A1Q13285 461 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 SLFNL1Q499Z3 407 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 PPP1R26Q5T8A7 1209 aaPredicted RBP8.02□□□□□ -1.13
CTR9-203ENST00000526874 RNF135Q8IUD6 432 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 UCN2Q96RP3 112 aa8.02□□□□□ -1.13
CTR9-203ENST00000526874 ST8SIA5O15466 376 aa8.01□□□□□ -1.13
CTR9-203ENST00000526874 ZIC2O95409 532 aaPredicted RBP8.01□□□□□ -1.13
CTR9-203ENST00000526874 Q6ZNB5 142 aa8.01□□□□□ -1.13
CTR9-203ENST00000526874 CDCA7Q9BWT1 371 aaPredicted RBP8.01□□□□□ -1.13
CTR9-203ENST00000526874 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
CTR9-203ENST00000526874 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
CTR9-203ENST00000526874 TIMP2P16035 220 aa8□□□□□ -1.13
CTR9-203ENST00000526874 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
CTR9-203ENST00000526874 SKIP12755 728 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 SCTRP47872 440 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
CTR9-203ENST00000526874 CBLBQ13191 982 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 PHTF2Q8N3S3 785 aa7.99□□□□□ -1.13
CTR9-203ENST00000526874 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
CTR9-203ENST00000526874 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
CTR9-203ENST00000526874 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
CTR9-203ENST00000526874 LCE2BO14633 110 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 CAPN5O15484 640 aaPredicted RBP7.97□□□□□ -1.13
CTR9-203ENST00000526874 IGSF3O75054 1194 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 DGAT1O75907 488 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 BMP1P13497 986 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 MYT1Q01538 1121 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 RNF20Q5VTR2 975 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 DACH1Q9UI36 760 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 EMILIN1Q9Y6C2 1016 aa7.97□□□□□ -1.13
CTR9-203ENST00000526874 AVPP01185 164 aa7.96□□□□□ -1.14
CTR9-203ENST00000526874 DHX9Q08211 1270 aaKnown RBP7.96□□□□□ -1.14
CTR9-203ENST00000526874 AXIN1O15169 862 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 LILRA1O75019 489 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 RFX1P22670 979 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
CTR9-203ENST00000526874 TRAF7Q6Q0C0 670 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 CCDC82Q8N4S0 544 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 AGBL1Q96MI9 1066 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
CTR9-203ENST00000526874 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
CTR9-203ENST00000526874 PALM3A6NDB9 673 aaPredicted RBP7.94□□□□□ -1.14
CTR9-203ENST00000526874 USP17L5A8MUK1 530 aa7.94□□□□□ -1.14
CTR9-203ENST00000526874 NCOA4Q13772 614 aa7.94□□□□□ -1.14
CTR9-203ENST00000526874 AAASQ9NRG9 546 aa7.94□□□□□ -1.14
CTR9-203ENST00000526874 ATP9BO43861 1147 aa7.93□□□□□ -1.14
CTR9-203ENST00000526874 STAU1O95793 577 aaKnown RBP7.93□□□□□ -1.14
CTR9-203ENST00000526874 RELBQ01201 579 aa7.93□□□□□ -1.14
CTR9-203ENST00000526874 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
CTR9-203ENST00000526874 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms