RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
SMCO4-203ENST00000526869 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
SMCO4-203ENST00000526869 SOX12O15370 315 aa26.98■■□□□ 1.91
SMCO4-203ENST00000526869 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
SMCO4-203ENST00000526869 HSP90AB2PQ58FF8 381 aa26.97■■□□□ 1.91
SMCO4-203ENST00000526869 HOXC9P31274 260 aa26.96■■□□□ 1.91
SMCO4-203ENST00000526869 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.91
SMCO4-203ENST00000526869 NEFMP07197 916 aa26.95■■□□□ 1.9
SMCO4-203ENST00000526869 WWC1Q8IX03 1113 aa26.95■■□□□ 1.9
SMCO4-203ENST00000526869 CDCA7LQ96GN5 454 aa26.95■■□□□ 1.9
SMCO4-203ENST00000526869 PRKAR2BP31323 418 aa26.94■■□□□ 1.9
SMCO4-203ENST00000526869 SPATA31A3Q5VYP0 1347 aa26.93■■□□□ 1.9
SMCO4-203ENST00000526869 GCP02774 474 aa26.93■■□□□ 1.9
SMCO4-203ENST00000526869 TMPOP42166 694 aaKnown RBP26.93■■□□□ 1.9
SMCO4-203ENST00000526869 SLFN5Q08AF3 891 aa26.93■■□□□ 1.9
SMCO4-203ENST00000526869 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
SMCO4-203ENST00000526869 TRMT2AQ8IZ69 625 aaKnown RBP26.93■■□□□ 1.9
SMCO4-203ENST00000526869 SOS2Q07890 1332 aaPredicted RBP26.92■■□□□ 1.9
SMCO4-203ENST00000526869 E9PSI1 815 aa26.92■■□□□ 1.9
SMCO4-203ENST00000526869 IP6K1Q92551 441 aa26.92■■□□□ 1.9
SMCO4-203ENST00000526869 CRYBG1Q9Y4K1 1723 aa26.92■■□□□ 1.9
SMCO4-203ENST00000526869 NEFLP07196 543 aa26.91■■□□□ 1.9
SMCO4-203ENST00000526869 KDRP35968 1356 aa26.9■■□□□ 1.9
SMCO4-203ENST00000526869 ARHGEF25Q86VW2 580 aa26.9■■□□□ 1.9
SMCO4-203ENST00000526869 SUPT16HQ9Y5B9 1047 aaKnown RBP26.9■■□□□ 1.9
SMCO4-203ENST00000526869 ABCC6O95255 1503 aa26.9■■□□□ 1.9
SMCO4-203ENST00000526869 IGSF1Q8N6C5 1336 aa26.9■■□□□ 1.9
SMCO4-203ENST00000526869 HMOX1P09601 288 aa26.89■■□□□ 1.9
SMCO4-203ENST00000526869 DUSP27Q5VZP5 1158 aa26.89■■□□□ 1.9
SMCO4-203ENST00000526869 LMOD2Q6P5Q4 547 aa26.89■■□□□ 1.9
SMCO4-203ENST00000526869 DDX17Q92841 729 aaKnown RBP26.89■■□□□ 1.9
SMCO4-203ENST00000526869 RRP7AQ9Y3A4 280 aaKnown RBP26.89■■□□□ 1.9
SMCO4-203ENST00000526869 RNF123Q5XPI4 1314 aa26.88■■□□□ 1.89
SMCO4-203ENST00000526869 NFE2L2Q16236 605 aa26.87■■□□□ 1.89
SMCO4-203ENST00000526869 NEUROD2Q15784 382 aa26.86■■□□□ 1.89
SMCO4-203ENST00000526869 SULT6B1Q6IMI4 303 aa26.85■■□□□ 1.89
SMCO4-203ENST00000526869 IL16Q14005 1332 aa26.85■■□□□ 1.89
SMCO4-203ENST00000526869 RIPK4P57078 832 aa26.83■■□□□ 1.89
SMCO4-203ENST00000526869 TRIM35Q9UPQ4 493 aa26.83■■□□□ 1.89
SMCO4-203ENST00000526869 AEBP1Q8IUX7 1158 aa26.82■■□□□ 1.88
SMCO4-203ENST00000526869 PHACTR3Q96KR7 559 aa26.82■■□□□ 1.88
SMCO4-203ENST00000526869 EYA1Q99502 592 aa26.82■■□□□ 1.88
SMCO4-203ENST00000526869 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
SMCO4-203ENST00000526869 AHDC1Q5TGY3 1603 aaPredicted RBP26.82■■□□□ 1.88
SMCO4-203ENST00000526869 LMOD3Q0VAK6 560 aa26.8■■□□□ 1.88
SMCO4-203ENST00000526869 SPINK5Q9NQ38 1064 aaPredicted RBP26.8■■□□□ 1.88
SMCO4-203ENST00000526869 CPDO75976 1380 aa26.8■■□□□ 1.88
SMCO4-203ENST00000526869 CAMTA1Q9Y6Y1 1673 aa26.79■■□□□ 1.88
SMCO4-203ENST00000526869 ROBO1Q9Y6N7 1651 aa26.79■■□□□ 1.88
SMCO4-203ENST00000526869 MYH16Q9H6N6 1097 aa26.78■■□□□ 1.88
SMCO4-203ENST00000526869 NCAPD2Q15021 1401 aa26.78■■□□□ 1.88
SMCO4-203ENST00000526869 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SMCO4-203ENST00000526869 CALD1Q05682 793 aaKnown RBP26.77■■□□□ 1.88
SMCO4-203ENST00000526869 ERICH6BQ5W0A0 696 aa26.77■■□□□ 1.88
SMCO4-203ENST00000526869 DLG5Q8TDM6 1919 aa26.77■■□□□ 1.88
SMCO4-203ENST00000526869 ABCA3Q99758 1704 aa26.76■■□□□ 1.88
SMCO4-203ENST00000526869 FKBP8Q14318 412 aa26.76■■□□□ 1.87
SMCO4-203ENST00000526869 FAM208AQ9UK61 1670 aaKnown RBP26.73■■□□□ 1.87
SMCO4-203ENST00000526869 LMO7Q8WWI1 1683 aa26.73■■□□□ 1.87
SMCO4-203ENST00000526869 LTV1Q96GA3 475 aaPredicted RBP26.72■■□□□ 1.87
SMCO4-203ENST00000526869 ZBTB7CA1YPR0 619 aa26.71■■□□□ 1.87
SMCO4-203ENST00000526869 ZC3H6P61129 1189 aaKnown RBP26.7■■□□□ 1.86
SMCO4-203ENST00000526869 GAS2L2Q8NHY3 880 aa26.7■■□□□ 1.86
SMCO4-203ENST00000526869 ANKRD24Q8TF21 1146 aa26.7■■□□□ 1.86
SMCO4-203ENST00000526869 RRP1P56182 461 aaKnown RBP26.69■■□□□ 1.86
SMCO4-203ENST00000526869 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
SMCO4-203ENST00000526869 CT47B1P0C2W7 299 aaPredicted RBP26.68■■□□□ 1.86
SMCO4-203ENST00000526869 NBPF6Q5VWK0 638 aa26.68■■□□□ 1.86
SMCO4-203ENST00000526869 CABLES1Q8TDN4 633 aa26.68■■□□□ 1.86
SMCO4-203ENST00000526869 NBPF4Q96M43 638 aa26.68■■□□□ 1.86
SMCO4-203ENST00000526869 COL22A1Q8NFW1 1626 aaPredicted RBP26.68■■□□□ 1.86
SMCO4-203ENST00000526869 ERBB3P21860 1342 aa26.67■■□□□ 1.86
SMCO4-203ENST00000526869 RGPD2P0DJD1 1756 aa26.67■■□□□ 1.86
SMCO4-203ENST00000526869 KIAA0232Q92628 1395 aa26.67■■□□□ 1.86
SMCO4-203ENST00000526869 FANCIQ9NVI1 1328 aa26.66■■□□□ 1.86
SMCO4-203ENST00000526869 PLEKHG5O94827 1062 aa26.66■■□□□ 1.86
SMCO4-203ENST00000526869 AXIN2Q9Y2T1 843 aa26.66■■□□□ 1.86
SMCO4-203ENST00000526869 PLEKHG2Q9H7P9 1386 aa26.66■■□□□ 1.86
SMCO4-203ENST00000526869 HTATSF1O43719 755 aaKnown RBP26.65■■□□□ 1.86
SMCO4-203ENST00000526869 LRRC59Q96AG4 307 aaKnown RBP26.65■■□□□ 1.86
SMCO4-203ENST00000526869 IFT57Q9NWB7 429 aa26.65■■□□□ 1.86
SMCO4-203ENST00000526869 TOM1O60784 492 aa26.63■■□□□ 1.85
SMCO4-203ENST00000526869 GNAI1P63096 354 aa26.63■■□□□ 1.85
SMCO4-203ENST00000526869 MTHFSDQ2M296 383 aaKnown RBP26.63■■□□□ 1.85
SMCO4-203ENST00000526869 ZNF853P0CG23 659 aa26.62■■□□□ 1.85
SMCO4-203ENST00000526869 LRRC37A3O60309 1634 aa26.61■■□□□ 1.85
SMCO4-203ENST00000526869 COL16A1Q07092 1604 aaPredicted RBP26.61■■□□□ 1.85
SMCO4-203ENST00000526869 USHBP1Q8N6Y0 703 aa26.6■■□□□ 1.85
SMCO4-203ENST00000526869 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
SMCO4-203ENST00000526869 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.59■■□□□ 1.85
SMCO4-203ENST00000526869 HAP1P54257 671 aaPredicted RBP26.58■■□□□ 1.85
SMCO4-203ENST00000526869 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
SMCO4-203ENST00000526869 PRDM11Q9NQV5 511 aa26.58■■□□□ 1.85
SMCO4-203ENST00000526869 MAP3K5Q99683 1374 aa26.58■■□□□ 1.84
SMCO4-203ENST00000526869 IRX6P78412 446 aaPredicted RBP26.57■■□□□ 1.84
SMCO4-203ENST00000526869 TSR2Q969E8 191 aaKnown RBP26.57■■□□□ 1.84
SMCO4-203ENST00000526869 AMOTQ4VCS5 1084 aa26.56■■□□□ 1.84
SMCO4-203ENST00000526869 RTF1Q92541 710 aaKnown RBP26.56■■□□□ 1.84
SMCO4-203ENST00000526869 THUMPD2Q9BTF0 503 aaKnown RBP26.56■■□□□ 1.84
SMCO4-203ENST00000526869 CRB1P82279 1406 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms