RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
UBASH3B-204ENST00000526493 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
UBASH3B-204ENST00000526493 USP19O94966 1318 aa17.21■□□□□ 0.34
UBASH3B-204ENST00000526493 MED1Q15648 1581 aaPredicted RBP17.2■□□□□ 0.34
UBASH3B-204ENST00000526493 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
UBASH3B-204ENST00000526493 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
UBASH3B-204ENST00000526493 AMPHP49418 695 aa17.19■□□□□ 0.34
UBASH3B-204ENST00000526493 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
UBASH3B-204ENST00000526493 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
UBASH3B-204ENST00000526493 RGPD5Q99666 1765 aa17.19■□□□□ 0.34
UBASH3B-204ENST00000526493 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 RGPD2P0DJD1 1756 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
UBASH3B-204ENST00000526493 HMOX1P09601 288 aa17.17■□□□□ 0.34
UBASH3B-204ENST00000526493 HOXC9P31274 260 aa17.17■□□□□ 0.34
UBASH3B-204ENST00000526493 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
UBASH3B-204ENST00000526493 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
UBASH3B-204ENST00000526493 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
UBASH3B-204ENST00000526493 TMPOP42166 694 aaKnown RBP17.16■□□□□ 0.34
UBASH3B-204ENST00000526493 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
UBASH3B-204ENST00000526493 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
UBASH3B-204ENST00000526493 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
UBASH3B-204ENST00000526493 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
UBASH3B-204ENST00000526493 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
UBASH3B-204ENST00000526493 GCP02774 474 aa17.15■□□□□ 0.34
UBASH3B-204ENST00000526493 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
UBASH3B-204ENST00000526493 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 IP6K1Q92551 441 aa17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 COL18A1P39060 1754 aa17.14■□□□□ 0.33
UBASH3B-204ENST00000526493 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
UBASH3B-204ENST00000526493 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
UBASH3B-204ENST00000526493 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
UBASH3B-204ENST00000526493 E9PSI1 815 aa17.11■□□□□ 0.33
UBASH3B-204ENST00000526493 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
UBASH3B-204ENST00000526493 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
UBASH3B-204ENST00000526493 KDRP35968 1356 aa17.11■□□□□ 0.33
UBASH3B-204ENST00000526493 RIPK4P57078 832 aa17.1■□□□□ 0.33
UBASH3B-204ENST00000526493 EYA1Q99502 592 aa17.1■□□□□ 0.33
UBASH3B-204ENST00000526493 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
UBASH3B-204ENST00000526493 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
UBASH3B-204ENST00000526493 NEFLP07196 543 aa17.09■□□□□ 0.33
UBASH3B-204ENST00000526493 NEFMP07197 916 aa17.09■□□□□ 0.33
UBASH3B-204ENST00000526493 FKBP8Q14318 412 aa17.09■□□□□ 0.33
UBASH3B-204ENST00000526493 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
UBASH3B-204ENST00000526493 ABCC6O95255 1503 aa17.07■□□□□ 0.32
UBASH3B-204ENST00000526493 LTV1Q96GA3 475 aaPredicted RBP17.07■□□□□ 0.32
UBASH3B-204ENST00000526493 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
UBASH3B-204ENST00000526493 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
UBASH3B-204ENST00000526493 IL16Q14005 1332 aa17.05■□□□□ 0.32
UBASH3B-204ENST00000526493 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
UBASH3B-204ENST00000526493 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
UBASH3B-204ENST00000526493 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
UBASH3B-204ENST00000526493 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
UBASH3B-204ENST00000526493 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
UBASH3B-204ENST00000526493 CPDO75976 1380 aa17.03■□□□□ 0.32
UBASH3B-204ENST00000526493 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
UBASH3B-204ENST00000526493 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
UBASH3B-204ENST00000526493 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
UBASH3B-204ENST00000526493 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
UBASH3B-204ENST00000526493 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
UBASH3B-204ENST00000526493 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
UBASH3B-204ENST00000526493 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
UBASH3B-204ENST00000526493 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
UBASH3B-204ENST00000526493 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
UBASH3B-204ENST00000526493 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
UBASH3B-204ENST00000526493 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
UBASH3B-204ENST00000526493 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
UBASH3B-204ENST00000526493 KIAA0232Q92628 1395 aa17■□□□□ 0.31
UBASH3B-204ENST00000526493 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
UBASH3B-204ENST00000526493 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
UBASH3B-204ENST00000526493 LRRC37A3O60309 1634 aa16.99■□□□□ 0.31
UBASH3B-204ENST00000526493 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
UBASH3B-204ENST00000526493 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
UBASH3B-204ENST00000526493 COL16A1Q07092 1604 aaPredicted RBP16.98■□□□□ 0.31
UBASH3B-204ENST00000526493 ERBB3P21860 1342 aa16.97■□□□□ 0.31
UBASH3B-204ENST00000526493 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
UBASH3B-204ENST00000526493 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
UBASH3B-204ENST00000526493 CHRNA2Q15822 529 aa16.97■□□□□ 0.31
UBASH3B-204ENST00000526493 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
UBASH3B-204ENST00000526493 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
UBASH3B-204ENST00000526493 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
UBASH3B-204ENST00000526493 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
UBASH3B-204ENST00000526493 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
UBASH3B-204ENST00000526493 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
UBASH3B-204ENST00000526493 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
UBASH3B-204ENST00000526493 GNAI1P63096 354 aa16.93■□□□□ 0.3
UBASH3B-204ENST00000526493 EXOSC9Q06265 439 aaKnown RBP16.93■□□□□ 0.3
UBASH3B-204ENST00000526493 CRB1P82279 1406 aa16.93■□□□□ 0.3
UBASH3B-204ENST00000526493 TOM1O60784 492 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms