RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 MED1Q15648 1581 aaPredicted RBP15.52■□□□□ 0.07
CSTF3-205ENST00000524775 FLT4P35916 1363 aa15.51■□□□□ 0.07
CSTF3-205ENST00000524775 USP19O94966 1318 aa15.51■□□□□ 0.07
CSTF3-205ENST00000524775 XPCQ01831 940 aaPredicted RBP15.51■□□□□ 0.07
CSTF3-205ENST00000524775 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
CSTF3-205ENST00000524775 TMPOP42166 694 aaKnown RBP15.5■□□□□ 0.07
CSTF3-205ENST00000524775 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
CSTF3-205ENST00000524775 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
CSTF3-205ENST00000524775 COL18A1P39060 1754 aa15.49■□□□□ 0.07
CSTF3-205ENST00000524775 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
CSTF3-205ENST00000524775 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
CSTF3-205ENST00000524775 SOX12O15370 315 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 HOXC9P31274 260 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 PRKAR2BP31323 418 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 WDR63Q8IWG1 891 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
CSTF3-205ENST00000524775 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
CSTF3-205ENST00000524775 HMOX1P09601 288 aa15.47■□□□□ 0.07
CSTF3-205ENST00000524775 FKBP8Q14318 412 aa15.47■□□□□ 0.07
CSTF3-205ENST00000524775 SLAIN2Q9P270 581 aa15.47■□□□□ 0.07
CSTF3-205ENST00000524775 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
CSTF3-205ENST00000524775 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 E9PSI1 815 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 AMPHP49418 695 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 AEBP1Q8IUX7 1158 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 KCNH5Q8NCM2 988 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 IP6K1Q92551 441 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 KDRP35968 1356 aa15.45■□□□□ 0.06
CSTF3-205ENST00000524775 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 IGSF1Q8N6C5 1336 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 TNS3Q68CZ2 1445 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 ABCA3Q99758 1704 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 GCP02774 474 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
CSTF3-205ENST00000524775 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
CSTF3-205ENST00000524775 MAPK8IP3Q9UPT6 1336 aa15.43■□□□□ 0.06
CSTF3-205ENST00000524775 EYA1Q99502 592 aa15.43■□□□□ 0.06
CSTF3-205ENST00000524775 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
CSTF3-205ENST00000524775 RIPK4P57078 832 aa15.42■□□□□ 0.06
CSTF3-205ENST00000524775 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
CSTF3-205ENST00000524775 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
CSTF3-205ENST00000524775 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
CSTF3-205ENST00000524775 IL16Q14005 1332 aa15.41■□□□□ 0.06
CSTF3-205ENST00000524775 NEFLP07196 543 aa15.4■□□□□ 0.06
CSTF3-205ENST00000524775 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
CSTF3-205ENST00000524775 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
CSTF3-205ENST00000524775 ROBO1Q9Y6N7 1651 aa15.38■□□□□ 0.05
CSTF3-205ENST00000524775 ABCC6O95255 1503 aa15.38■□□□□ 0.05
CSTF3-205ENST00000524775 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
CSTF3-205ENST00000524775 ERICH6BQ5W0A0 696 aa15.38■□□□□ 0.05
CSTF3-205ENST00000524775 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
CSTF3-205ENST00000524775 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
CSTF3-205ENST00000524775 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
CSTF3-205ENST00000524775 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
CSTF3-205ENST00000524775 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
CSTF3-205ENST00000524775 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
CSTF3-205ENST00000524775 NBPF6Q5VWK0 638 aa15.35■□□□□ 0.05
CSTF3-205ENST00000524775 NBPF4Q96M43 638 aa15.35■□□□□ 0.05
CSTF3-205ENST00000524775 CPDO75976 1380 aa15.35■□□□□ 0.05
CSTF3-205ENST00000524775 NEFMP07197 916 aa15.34■□□□□ 0.05
CSTF3-205ENST00000524775 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
CSTF3-205ENST00000524775 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
CSTF3-205ENST00000524775 LRRC37A3O60309 1634 aa15.34■□□□□ 0.05
CSTF3-205ENST00000524775 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
CSTF3-205ENST00000524775 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
CSTF3-205ENST00000524775 THUMPD2Q9BTF0 503 aaKnown RBP15.33■□□□□ 0.04
CSTF3-205ENST00000524775 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
CSTF3-205ENST00000524775 COL22A1Q8NFW1 1626 aaPredicted RBP15.32■□□□□ 0.04
CSTF3-205ENST00000524775 ZC3H6P61129 1189 aaKnown RBP15.32■□□□□ 0.04
CSTF3-205ENST00000524775 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
CSTF3-205ENST00000524775 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
CSTF3-205ENST00000524775 ANKRD24Q8TF21 1146 aa15.31■□□□□ 0.04
CSTF3-205ENST00000524775 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
CSTF3-205ENST00000524775 PLIN1O60240 522 aa15.3■□□□□ 0.04
CSTF3-205ENST00000524775 CRB1P82279 1406 aa15.3■□□□□ 0.04
CSTF3-205ENST00000524775 LMOD3Q0VAK6 560 aa15.3■□□□□ 0.04
CSTF3-205ENST00000524775 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
CSTF3-205ENST00000524775 LRRC59Q96AG4 307 aaKnown RBP15.3■□□□□ 0.04
CSTF3-205ENST00000524775 KIAA0232Q92628 1395 aa15.29■□□□□ 0.04
CSTF3-205ENST00000524775 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
CSTF3-205ENST00000524775 BCAR3O75815 825 aa15.29■□□□□ 0.04
CSTF3-205ENST00000524775 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
CSTF3-205ENST00000524775 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
CSTF3-205ENST00000524775 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
CSTF3-205ENST00000524775 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
CSTF3-205ENST00000524775 ERBB3P21860 1342 aa15.28■□□□□ 0.04
CSTF3-205ENST00000524775 CT47B1P0C2W7 299 aaPredicted RBP15.28■□□□□ 0.04
CSTF3-205ENST00000524775 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
CSTF3-205ENST00000524775 PHLPP1O60346 1717 aa15.28■□□□□ 0.04
CSTF3-205ENST00000524775 COL16A1Q07092 1604 aaPredicted RBP15.28■□□□□ 0.04
CSTF3-205ENST00000524775 HTATSF1O43719 755 aaKnown RBP15.27■□□□□ 0.04
CSTF3-205ENST00000524775 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.04
CSTF3-205ENST00000524775 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
CSTF3-205ENST00000524775 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
CSTF3-205ENST00000524775 PPP4R2Q9NY27 417 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms