RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 FOXD1Q16676 465 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 C10orf67Q8IYJ2 551 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 JRKLQ9Y4A0 524 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 GOLGA6L4A6NEF3 574 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
LIN7C-202ENST00000524596 TMX1Q9H3N1 280 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 PAXBP1Q9Y5B6 917 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
LIN7C-202ENST00000524596 KRT222Q8N1A0 295 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 WDR66Q8TBY9 1149 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 MRFAP1L1Q96HT8 127 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 EXOC1Q9NV70 894 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 NASPP49321 788 aaPredicted RBP8.22□□□□□ -1.09
LIN7C-202ENST00000524596 PSMD2Q13200 908 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 KLHL23Q8NBE8 558 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 GRPEL1Q9HAV7 217 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC191Q8NCU4 936 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 UTP6Q9NYH9 597 aaKnown RBP8.22□□□□□ -1.09
LIN7C-202ENST00000524596 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
LIN7C-202ENST00000524596 GOLGA2Q08379 1002 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 COMMD10Q9Y6G5 202 aa8.22□□□□□ -1.09
LIN7C-202ENST00000524596 ECM2O94769 699 aaPredicted RBP8.21□□□□□ -1.09
LIN7C-202ENST00000524596 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.09
LIN7C-202ENST00000524596 C17orf50Q8WW18 174 aa8.21□□□□□ -1.09
LIN7C-202ENST00000524596 SMC2O95347 1197 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 RWDD2BP57060 319 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 ARMC9Q7Z3E5 817 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 NUP133Q8WUM0 1156 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 RB1CC1Q8TDY2 1594 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 GTF2F1P35269 517 aaKnown RBP eCLIP8.21□□□□□ -1.1
LIN7C-202ENST00000524596 SYCP1Q15431 976 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 BTN2A1Q7KYR7 527 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 KIF16BQ96L93 1317 aa8.21□□□□□ -1.1
LIN7C-202ENST00000524596 GUCY2CP25092 1073 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
LIN7C-202ENST00000524596 ERLIN1O75477 346 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 IVLP07476 585 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 CHGAP10645 457 aaKnown RBP8.2□□□□□ -1.1
LIN7C-202ENST00000524596 USP6NLQ92738 828 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 NBPF8Q3BBV2 869 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 ZNF280CQ8ND82 737 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 EEA1Q15075 1411 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 CDKL5O76039 1030 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 PAX7P23759 505 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 PDE4AP27815 886 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 JMYQ8N9B5 988 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 PPM1EQ8WY54 764 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 TRIM11Q96F44 468 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
LIN7C-202ENST00000524596 hCG_2014768A0A024R1R8 64 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 BAG4O95429 457 aaKnown RBP8.19□□□□□ -1.1
LIN7C-202ENST00000524596 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
LIN7C-202ENST00000524596 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
LIN7C-202ENST00000524596 FILIP1LQ4L180 1135 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 VPS37AQ8NEZ2 397 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 ERBB3P21860 1342 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 RIOK3O14730 519 aaKnown RBP8.19□□□□□ -1.1
LIN7C-202ENST00000524596 VCAM1P19320 739 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 CA8P35219 290 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 NFXL1Q6ZNB6 911 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 PMFBP1Q8TBY8 1022 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 ATRIPQ8WXE1 791 aa8.19□□□□□ -1.1
LIN7C-202ENST00000524596 GCKP35557 465 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 FLT3P36888 993 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 BHMTQ93088 406 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 ZBTB22O15209 634 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 CAND2O75155 1236 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 CCDC80Q76M96 950 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 VEZTQ9HBM0 779 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 IRF6O14896 467 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 IGBP1P78318 339 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 CAVIN1Q6NZI2 390 aaKnown RBP8.18□□□□□ -1.1
LIN7C-202ENST00000524596 CHCHD4Q8N4Q1 142 aa8.18□□□□□ -1.1
LIN7C-202ENST00000524596 SLKQ9H2G2 1235 aaPredicted RBP8.18□□□□□ -1.1
LIN7C-202ENST00000524596 GPBP1L1Q9HC44 474 aaPredicted RBP8.18□□□□□ -1.1
LIN7C-202ENST00000524596 RLBP1P12271 317 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 NUCB1Q02818 461 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 UBE2Q1Q7Z7E8 422 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 TRIM6Q9C030 488 aaPredicted RBP8.17□□□□□ -1.1
LIN7C-202ENST00000524596 DDX46Q7L014 1031 aaKnown RBP8.17□□□□□ -1.1
LIN7C-202ENST00000524596 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
LIN7C-202ENST00000524596 ZSCAN20P17040 1043 aaPredicted RBP8.17□□□□□ -1.1
LIN7C-202ENST00000524596 ZSCAN26Q16670 478 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 PUS10Q3MIT2 529 aaKnown RBP8.17□□□□□ -1.1
LIN7C-202ENST00000524596 XBP1P17861 261 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
LIN7C-202ENST00000524596 KAT6BQ8WYB5 2073 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 DYTNA2CJ06 578 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
LIN7C-202ENST00000524596 ANKRD24Q8TF21 1146 aa8.16□□□□□ -1.1
LIN7C-202ENST00000524596 TCEAL9Q9UHQ7 104 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms