RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 COG3Q96JB2 828 aa15.11■□□□□ 0.01
SCUBE2-208ENST00000524317 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
SCUBE2-208ENST00000524317 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
SCUBE2-208ENST00000524317 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
SCUBE2-208ENST00000524317 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
SCUBE2-208ENST00000524317 KIF20BQ96Q89 1820 aa15.1■□□□□ 0.01
SCUBE2-208ENST00000524317 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
SCUBE2-208ENST00000524317 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
SCUBE2-208ENST00000524317 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
SCUBE2-208ENST00000524317 FCHSD2O94868 740 aa15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 PNNQ9H307 717 aaKnown RBP15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 ACEP12821 1306 aa15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
SCUBE2-208ENST00000524317 RAD21O60216 631 aa15.08■□□□□ 0
SCUBE2-208ENST00000524317 PKNOX2Q96KN3 472 aa15.08■□□□□ 0
SCUBE2-208ENST00000524317 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
SCUBE2-208ENST00000524317 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
SCUBE2-208ENST00000524317 GTPBP6O43824 516 aaPredicted RBP15.06■□□□□ 0
SCUBE2-208ENST00000524317 IL13P35225 146 aa15.06■□□□□ 0
SCUBE2-208ENST00000524317 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
SCUBE2-208ENST00000524317 DIP2AQ14689 1571 aa15.06■□□□□ 0
SCUBE2-208ENST00000524317 CDK12Q9NYV4 1490 aaPredicted RBP15.06■□□□□ 0
SCUBE2-208ENST00000524317 RIPK4P57078 832 aa15.06■□□□□ 0
SCUBE2-208ENST00000524317 RGS22Q8NE09 1264 aa15.06■□□□□ 0
SCUBE2-208ENST00000524317 PRKAR2BP31323 418 aa15.05■□□□□ 0
SCUBE2-208ENST00000524317 CEP170BQ9Y4F5 1589 aaPredicted RBP15.05■□□□□ -0
SCUBE2-208ENST00000524317 USP6P35125 1406 aa15.05■□□□□ -0
SCUBE2-208ENST00000524317 PDE3AQ14432 1141 aa15.05■□□□□ -0
SCUBE2-208ENST00000524317 IL27Q8NEV9 243 aa15.05■□□□□ -0
SCUBE2-208ENST00000524317 MON2Q7Z3U7 1717 aa15.05■□□□□ -0
SCUBE2-208ENST00000524317 KDM2BQ8NHM5 1336 aa15.04■□□□□ -0
SCUBE2-208ENST00000524317 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
SCUBE2-208ENST00000524317 KCNA6P17658 529 aa15.04■□□□□ -0
SCUBE2-208ENST00000524317 IL16Q14005 1332 aa15.04■□□□□ -0
SCUBE2-208ENST00000524317 TSR2Q969E8 191 aaKnown RBP15.04■□□□□ -0
SCUBE2-208ENST00000524317 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
SCUBE2-208ENST00000524317 PIK3R4Q99570 1358 aa15.03■□□□□ -0
SCUBE2-208ENST00000524317 HMOX1P09601 288 aa15.03■□□□□ -0
SCUBE2-208ENST00000524317 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
SCUBE2-208ENST00000524317 LRRC7Q96NW7 1537 aa15.03■□□□□ -0
SCUBE2-208ENST00000524317 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
SCUBE2-208ENST00000524317 MTMR7Q9Y216 660 aa15.03■□□□□ -0
SCUBE2-208ENST00000524317 OVOS2A0A0J9YW53 1432 aa15.02■□□□□ -0
SCUBE2-208ENST00000524317 OVOS2Q6IE36 1432 aa15.02■□□□□ -0
SCUBE2-208ENST00000524317 SSH2Q76I76 1423 aa15.02■□□□□ -0
SCUBE2-208ENST00000524317 TOPAZ1Q8N9V7 1692 aa15.02■□□□□ -0
SCUBE2-208ENST00000524317 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
SCUBE2-208ENST00000524317 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
SCUBE2-208ENST00000524317 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 PHACTR3Q96KR7 559 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 AKAP12Q02952 1782 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 NEFMP07197 916 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 CENPQQ7L2Z9 268 aaPredicted RBP15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 BCL2L13Q9BXK5 485 aa15.01□□□□□ -0.01
SCUBE2-208ENST00000524317 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
SCUBE2-208ENST00000524317 EXOSC9Q06265 439 aaKnown RBP15□□□□□ -0.01
SCUBE2-208ENST00000524317 KCNV2Q8TDN2 545 aa15□□□□□ -0.01
SCUBE2-208ENST00000524317 XRN1Q8IZH2 1706 aaKnown RBP14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 NFE2L2Q16236 605 aa14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 RIMS1Q86UR5 1692 aaKnown RBP14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 ITSN1Q15811 1721 aa14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 NGDNQ8NEJ9 315 aaKnown RBP14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
SCUBE2-208ENST00000524317 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
SCUBE2-208ENST00000524317 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
SCUBE2-208ENST00000524317 MS4A1P11836 297 aa14.98□□□□□ -0.01
SCUBE2-208ENST00000524317 FOXD4L5Q5VV16 416 aaPredicted RBP14.98□□□□□ -0.01
SCUBE2-208ENST00000524317 FOXD4L4Q8WXT5 416 aaPredicted RBP14.98□□□□□ -0.01
SCUBE2-208ENST00000524317 EIF4A2Q14240 407 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-208ENST00000524317 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
SCUBE2-208ENST00000524317 RLBP1P12271 317 aa14.97□□□□□ -0.01
SCUBE2-208ENST00000524317 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
SCUBE2-208ENST00000524317 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
SCUBE2-208ENST00000524317 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
SCUBE2-208ENST00000524317 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
SCUBE2-208ENST00000524317 HSP90AB2PQ58FF8 381 aa14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 SOX12O15370 315 aa14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 THUMPD2Q9BTF0 503 aaKnown RBP14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 GPBP1L1Q9HC44 474 aaPredicted RBP14.94□□□□□ -0.02
SCUBE2-208ENST00000524317 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
SCUBE2-208ENST00000524317 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
SCUBE2-208ENST00000524317 PDE4AP27815 886 aa14.93□□□□□ -0.02
SCUBE2-208ENST00000524317 ZKSCAN2Q63HK3 967 aa14.93□□□□□ -0.02
SCUBE2-208ENST00000524317 AEBP1Q8IUX7 1158 aa14.93□□□□□ -0.02
SCUBE2-208ENST00000524317 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
SCUBE2-208ENST00000524317 IGHDP01880 384 aa14.92□□□□□ -0.02
SCUBE2-208ENST00000524317 AAMPQ13685 434 aa14.92□□□□□ -0.02
SCUBE2-208ENST00000524317 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
SCUBE2-208ENST00000524317 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
SCUBE2-208ENST00000524317 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms