RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SDCBP-212ENST00000523483 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
SDCBP-212ENST00000523483 AXIN2Q9Y2T1 843 aa12.36□□□□□ -0.43
SDCBP-212ENST00000523483 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
SDCBP-212ENST00000523483 IL13P35225 146 aa12.35□□□□□ -0.43
SDCBP-212ENST00000523483 IP6K1Q92551 441 aa12.35□□□□□ -0.43
SDCBP-212ENST00000523483 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 USP19O94966 1318 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 EVA1CP58658 441 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 HSPA1LP34931 641 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 EYA1Q99502 592 aa12.34□□□□□ -0.43
SDCBP-212ENST00000523483 RUNDC1Q96C34 613 aa12.33□□□□□ -0.44
SDCBP-212ENST00000523483 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
SDCBP-212ENST00000523483 PNPLA6Q8IY17 1366 aa12.32□□□□□ -0.44
SDCBP-212ENST00000523483 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
SDCBP-212ENST00000523483 TRPM3Q9HCF6 1732 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-212ENST00000523483 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
SDCBP-212ENST00000523483 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
SDCBP-212ENST00000523483 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
SDCBP-212ENST00000523483 PHACTR3Q96KR7 559 aa12.31□□□□□ -0.44
SDCBP-212ENST00000523483 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
SDCBP-212ENST00000523483 MED1Q15648 1581 aaPredicted RBP12.31□□□□□ -0.44
SDCBP-212ENST00000523483 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
SDCBP-212ENST00000523483 INSRP06213 1382 aa12.3□□□□□ -0.44
SDCBP-212ENST00000523483 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
SDCBP-212ENST00000523483 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
SDCBP-212ENST00000523483 FCHSD2O94868 740 aa12.3□□□□□ -0.44
SDCBP-212ENST00000523483 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
SDCBP-212ENST00000523483 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
SDCBP-212ENST00000523483 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
SDCBP-212ENST00000523483 RIPK4P57078 832 aa12.29□□□□□ -0.44
SDCBP-212ENST00000523483 LAS1LQ9Y4W2 734 aaKnown RBP12.29□□□□□ -0.44
SDCBP-212ENST00000523483 COL3A1P02461 1466 aaPredicted RBP12.29□□□□□ -0.44
SDCBP-212ENST00000523483 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
SDCBP-212ENST00000523483 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
SDCBP-212ENST00000523483 ERBB3P21860 1342 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 NFAT5O94916 1531 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
SDCBP-212ENST00000523483 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
SDCBP-212ENST00000523483 NHSL1Q5SYE7 1610 aa12.27□□□□□ -0.45
SDCBP-212ENST00000523483 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
SDCBP-212ENST00000523483 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
SDCBP-212ENST00000523483 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
SDCBP-212ENST00000523483 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
SDCBP-212ENST00000523483 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
SDCBP-212ENST00000523483 A0A0G2JS52 829 aa12.26□□□□□ -0.45
SDCBP-212ENST00000523483 MYT1Q01538 1121 aa12.26□□□□□ -0.45
SDCBP-212ENST00000523483 LTN1O94822 1766 aa12.26□□□□□ -0.45
SDCBP-212ENST00000523483 SLIT3O75094 1523 aa12.26□□□□□ -0.45
SDCBP-212ENST00000523483 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
SDCBP-212ENST00000523483 PLEKHF1Q96S99 279 aa12.25□□□□□ -0.45
SDCBP-212ENST00000523483 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
SDCBP-212ENST00000523483 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
SDCBP-212ENST00000523483 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
SDCBP-212ENST00000523483 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
SDCBP-212ENST00000523483 JCADQ9P266 1359 aa12.24□□□□□ -0.45
SDCBP-212ENST00000523483 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
SDCBP-212ENST00000523483 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
SDCBP-212ENST00000523483 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
SDCBP-212ENST00000523483 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
SDCBP-212ENST00000523483 MCM10Q7L590 875 aa12.23□□□□□ -0.45
SDCBP-212ENST00000523483 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
SDCBP-212ENST00000523483 NFE2L2Q16236 605 aa12.23□□□□□ -0.45
SDCBP-212ENST00000523483 CPDO75976 1380 aa12.23□□□□□ -0.45
SDCBP-212ENST00000523483 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
SDCBP-212ENST00000523483 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
SDCBP-212ENST00000523483 IQSEC2Q5JU85 1478 aa12.22□□□□□ -0.45
SDCBP-212ENST00000523483 TATP17735 454 aaPredicted RBP12.22□□□□□ -0.45
SDCBP-212ENST00000523483 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
SDCBP-212ENST00000523483 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
SDCBP-212ENST00000523483 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.46
SDCBP-212ENST00000523483 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.46
SDCBP-212ENST00000523483 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.46
SDCBP-212ENST00000523483 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
SDCBP-212ENST00000523483 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
SDCBP-212ENST00000523483 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
SDCBP-212ENST00000523483 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
SDCBP-212ENST00000523483 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
SDCBP-212ENST00000523483 TRIM35Q9UPQ4 493 aa12.19□□□□□ -0.46
SDCBP-212ENST00000523483 RGPD5Q99666 1765 aa12.19□□□□□ -0.46
SDCBP-212ENST00000523483 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
SDCBP-212ENST00000523483 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
SDCBP-212ENST00000523483 ELL2O00472 640 aaPredicted RBP12.18□□□□□ -0.46
SDCBP-212ENST00000523483 USP21Q9UK80 565 aa12.18□□□□□ -0.46
SDCBP-212ENST00000523483 KDRP35968 1356 aa12.17□□□□□ -0.46
SDCBP-212ENST00000523483 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
SDCBP-212ENST00000523483 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
SDCBP-212ENST00000523483 GNAT3A8MTJ3 354 aa12.17□□□□□ -0.46
SDCBP-212ENST00000523483 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
SDCBP-212ENST00000523483 IL2RBP14784 551 aa12.17□□□□□ -0.46
SDCBP-212ENST00000523483 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
SDCBP-212ENST00000523483 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
SDCBP-212ENST00000523483 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
SDCBP-212ENST00000523483 RGPD2P0DJD1 1756 aa12.16□□□□□ -0.46
SDCBP-212ENST00000523483 E9PSI1 815 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms