RNA–Protein interactions for RNA: ENST00000523070.1

IGKV2-4-201, Transcript of immunoglobulin kappa variable 2-4 (pseudogene), humanhuman

BASIC

Gene IGKV2-4, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-4-201ENST00000523070 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
IGKV2-4-201ENST00000523070 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
IGKV2-4-201ENST00000523070 ABCA8O94911 1581 aa11.37□□□□□ -0.59
IGKV2-4-201ENST00000523070 C3P01024 1663 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 ADH1BP00325 375 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 MTMR2Q13614 643 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 SPSB2Q99619 263 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
IGKV2-4-201ENST00000523070 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
IGKV2-4-201ENST00000523070 CABLES1Q8TDN4 633 aa11.35□□□□□ -0.59
IGKV2-4-201ENST00000523070 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
IGKV2-4-201ENST00000523070 CPS1P31327 1500 aa11.35□□□□□ -0.59
IGKV2-4-201ENST00000523070 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
IGKV2-4-201ENST00000523070 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
IGKV2-4-201ENST00000523070 MSS51Q4VC12 460 aa11.34□□□□□ -0.59
IGKV2-4-201ENST00000523070 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
IGKV2-4-201ENST00000523070 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
IGKV2-4-201ENST00000523070 TCOF1Q13428 1488 aaKnown RBP11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 MAGI2Q86UL8 1455 aa11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 C9orf84Q5VXU9 1444 aa11.33□□□□□ -0.6
IGKV2-4-201ENST00000523070 SETBP1Q9Y6X0 1596 aa11.32□□□□□ -0.6
IGKV2-4-201ENST00000523070 ATP10AO60312 1499 aa11.32□□□□□ -0.6
IGKV2-4-201ENST00000523070 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
IGKV2-4-201ENST00000523070 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
IGKV2-4-201ENST00000523070 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
IGKV2-4-201ENST00000523070 PLA2R1Q13018 1463 aa11.3□□□□□ -0.6
IGKV2-4-201ENST00000523070 MMP16P51512 607 aa11.29□□□□□ -0.6
IGKV2-4-201ENST00000523070 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
IGKV2-4-201ENST00000523070 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 NUTM2BA6NNL0 878 aaPredicted RBP11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 NUTM2EB1AL46 878 aaPredicted RBP11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 RFC5P40937 340 aa11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 DESI1Q6ICB0 168 aa11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 NUTM2AQ8IVF1 878 aaPredicted RBP11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
IGKV2-4-201ENST00000523070 ATP10BO94823 1461 aa11.27□□□□□ -0.6
IGKV2-4-201ENST00000523070 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
IGKV2-4-201ENST00000523070 S1PR4O95977 384 aa11.26□□□□□ -0.61
IGKV2-4-201ENST00000523070 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
IGKV2-4-201ENST00000523070 JUNDP17535 347 aa11.25□□□□□ -0.61
IGKV2-4-201ENST00000523070 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
IGKV2-4-201ENST00000523070 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
IGKV2-4-201ENST00000523070 A0A0G2JS52 829 aa11.23□□□□□ -0.61
IGKV2-4-201ENST00000523070 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
IGKV2-4-201ENST00000523070 VWDEQ8N2E2 1590 aa11.21□□□□□ -0.61
IGKV2-4-201ENST00000523070 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
IGKV2-4-201ENST00000523070 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
IGKV2-4-201ENST00000523070 NPATQ14207 1427 aa11.2□□□□□ -0.62
IGKV2-4-201ENST00000523070 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
IGKV2-4-201ENST00000523070 PTPRNQ16849 979 aa11.2□□□□□ -0.62
IGKV2-4-201ENST00000523070 TMEM259Q4ZIN3 620 aa11.2□□□□□ -0.62
IGKV2-4-201ENST00000523070 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 ZNF142P52746 1687 aaPredicted RBP11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 RNF17Q9BXT8 1623 aaKnown RBP11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
IGKV2-4-201ENST00000523070 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 MYO3AQ8NEV4 1616 aa11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 PPEF1O14829 653 aaPredicted RBP11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 GGCXP38435 758 aa11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 CEP170BQ9Y4F5 1589 aaPredicted RBP11.18□□□□□ -0.62
IGKV2-4-201ENST00000523070 AP1G2O75843 785 aa11.17□□□□□ -0.62
IGKV2-4-201ENST00000523070 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
IGKV2-4-201ENST00000523070 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
IGKV2-4-201ENST00000523070 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
IGKV2-4-201ENST00000523070 TSC1Q92574 1164 aa11.16□□□□□ -0.62
IGKV2-4-201ENST00000523070 FCF1Q9Y324 198 aaKnown RBP11.16□□□□□ -0.62
IGKV2-4-201ENST00000523070 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
IGKV2-4-201ENST00000523070 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
IGKV2-4-201ENST00000523070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
IGKV2-4-201ENST00000523070 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
IGKV2-4-201ENST00000523070 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
IGKV2-4-201ENST00000523070 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
IGKV2-4-201ENST00000523070 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
IGKV2-4-201ENST00000523070 RXRBP28702 533 aa11.13□□□□□ -0.63
IGKV2-4-201ENST00000523070 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
IGKV2-4-201ENST00000523070 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
IGKV2-4-201ENST00000523070 AGLP35573 1532 aa11.13□□□□□ -0.63
IGKV2-4-201ENST00000523070 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
IGKV2-4-201ENST00000523070 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
IGKV2-4-201ENST00000523070 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
IGKV2-4-201ENST00000523070 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
IGKV2-4-201ENST00000523070 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
IGKV2-4-201ENST00000523070 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
IGKV2-4-201ENST00000523070 LRP6O75581 1613 aa11.1□□□□□ -0.63
IGKV2-4-201ENST00000523070 YY1P25490 414 aa11.1□□□□□ -0.63
IGKV2-4-201ENST00000523070 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
IGKV2-4-201ENST00000523070 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 1844.2 ms