RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 CDK5RAP3Q96JB5 506 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 NAT10Q9H0A0 1025 aaKnown RBP19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 SIL1Q9H173 461 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 ODF2Q5BJF6 829 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 TMEM132AQ24JP5 1023 aa19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 NFE2L2Q16236 605 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 TRIM22Q8IYM9 498 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 ATF7IPQ6VMQ6 1270 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.7
PCDHA3-201ENST00000522353 TMOD2Q9NZR1 351 aa19.39■□□□□ 0.7
PCDHA3-201ENST00000522353 ATP2B1P20020 1258 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 NEK4P51957 841 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ZPR1O75312 459 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 CDK13Q14004 1512 aaKnown RBP19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ZSCAN29Q8IWY8 852 aaPredicted RBP19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 RABEP1Q15276 862 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 FOXO3O43524 673 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 CTNNA3Q9UI47 895 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 NAP1L1P55209 391 aaKnown RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 RAI14Q9P0K7 980 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 AACSQ86V21 672 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 CCDC69A6NI79 296 aa19.34■□□□□ 0.69
PCDHA3-201ENST00000522353 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
PCDHA3-201ENST00000522353 KDM4AO75164 1064 aa19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 LARP1Q6PKG0 1096 aaKnown RBP19.33■□□□□ 0.68
PCDHA3-201ENST00000522353 TDO2P48775 406 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 STK38Q15208 465 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 CEBPAP49715 358 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 IDI1Q13907 227 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 EXOC5O00471 708 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 ZFYVE27Q5T4F4 411 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 BCAR3O75815 825 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 AKAP2Q9Y2D5 859 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 MBD3O95983 291 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 ZNF287Q9HBT7 754 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 CDKL5O76039 1030 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 RDXP35241 583 aaKnown RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 METTL24Q5JXM2 366 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 IFIT1P09914 478 aaKnown RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 KIF14Q15058 1648 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 FILIP1LQ4L180 1135 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 MAGEC2Q9UBF1 373 aaPredicted RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 CAVIN4Q5BKX8 364 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 KRT32Q14532 448 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 IDH1O75874 414 aaKnown RBP19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 NOL7Q9UMY1 257 aaKnown RBP19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms