RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-219ENST00000522006 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 STIM1Q13586 685 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 SIL1Q9H173 461 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 KRT85P78386 507 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
LAMA4-219ENST00000522006 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
LAMA4-219ENST00000522006 ZRSR2Q15696 482 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 SEPT7Q16181 437 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 TRIM22Q8IYM9 498 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 ERLIN1O75477 346 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 ANKRD62A6NC57 917 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
LAMA4-219ENST00000522006 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
LAMA4-219ENST00000522006 FAM193AP78312 1265 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 ZHX3Q9H4I2 956 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
LAMA4-219ENST00000522006 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 SPATA32Q96LK8 384 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
LAMA4-219ENST00000522006 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
LAMA4-219ENST00000522006 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 PDRG1Q9NUG6 133 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 ARHGAP5Q13017 1502 aa13.46□□□□□ -0.25
LAMA4-219ENST00000522006 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 KIF21BO75037 1637 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
LAMA4-219ENST00000522006 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 NCOA2Q15596 1464 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
LAMA4-219ENST00000522006 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
LAMA4-219ENST00000522006 DHX37Q8IY37 1157 aaKnown RBP13.44□□□□□ -0.26
LAMA4-219ENST00000522006 NUP62CLQ9H1M0 184 aa13.44□□□□□ -0.26
LAMA4-219ENST00000522006 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
LAMA4-219ENST00000522006 TAX1BP1Q86VP1 789 aa13.44□□□□□ -0.26
LAMA4-219ENST00000522006 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
LAMA4-219ENST00000522006 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
LAMA4-219ENST00000522006 AACSQ86V21 672 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 SEPT11Q9NVA2 429 aaKnown RBP13.43□□□□□ -0.26
LAMA4-219ENST00000522006 JAKMIP1Q96N16 626 aaKnown RBP13.43□□□□□ -0.26
LAMA4-219ENST00000522006 SRCIN1Q9C0H9 1055 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 ESCO1Q5FWF5 840 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 CEP57L1Q8IYX8 460 aa13.43□□□□□ -0.26
LAMA4-219ENST00000522006 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
LAMA4-219ENST00000522006 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-219ENST00000522006 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
LAMA4-219ENST00000522006 CFAP45Q9UL16 551 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 CDKL5O76039 1030 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 MYL6BP14649 208 aa13.42□□□□□ -0.26
LAMA4-219ENST00000522006 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-219ENST00000522006 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
LAMA4-219ENST00000522006 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 CABP4P57796 275 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 MCM4P33991 863 aa13.41□□□□□ -0.26
LAMA4-219ENST00000522006 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
LAMA4-219ENST00000522006 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
LAMA4-219ENST00000522006 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
LAMA4-219ENST00000522006 KIAA1328Q86T90 577 aa13.4□□□□□ -0.26
LAMA4-219ENST00000522006 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
LAMA4-219ENST00000522006 STRN4Q9NRL3 753 aa13.4□□□□□ -0.26
LAMA4-219ENST00000522006 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-219ENST00000522006 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 SYCE3A1L190 88 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
LAMA4-219ENST00000522006 CAMK4Q16566 473 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
LAMA4-219ENST00000522006 GBP2P32456 591 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-219ENST00000522006 ESPNB1AK53 854 aa13.39□□□□□ -0.27
LAMA4-219ENST00000522006 SRGAP3O43295 1099 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 CASTP20810 708 aaKnown RBP13.38□□□□□ -0.27
LAMA4-219ENST00000522006 TDO2P48775 406 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms