RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
NEFM-205ENST00000521540 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
NEFM-205ENST00000521540 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
NEFM-205ENST00000521540 FTSJ3Q8IY81 847 aaKnown RBP16.99■□□□□ 0.31
NEFM-205ENST00000521540 ALDH1L2Q3SY69 923 aa16.99■□□□□ 0.31
NEFM-205ENST00000521540 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
NEFM-205ENST00000521540 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
NEFM-205ENST00000521540 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
NEFM-205ENST00000521540 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
NEFM-205ENST00000521540 DDX19BQ9UMR2 479 aa16.98■□□□□ 0.31
NEFM-205ENST00000521540 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
NEFM-205ENST00000521540 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 ITSN1Q15811 1721 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
NEFM-205ENST00000521540 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 RSPH6AQ9H0K4 717 aa16.97■□□□□ 0.31
NEFM-205ENST00000521540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
NEFM-205ENST00000521540 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
NEFM-205ENST00000521540 DCCP43146 1447 aa16.96■□□□□ 0.31
NEFM-205ENST00000521540 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
NEFM-205ENST00000521540 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
NEFM-205ENST00000521540 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
NEFM-205ENST00000521540 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
NEFM-205ENST00000521540 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
NEFM-205ENST00000521540 MSH6P52701 1360 aa16.94■□□□□ 0.3
NEFM-205ENST00000521540 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
NEFM-205ENST00000521540 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
NEFM-205ENST00000521540 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
NEFM-205ENST00000521540 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
NEFM-205ENST00000521540 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
NEFM-205ENST00000521540 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
NEFM-205ENST00000521540 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
NEFM-205ENST00000521540 C19orf44Q9H6X5 657 aa16.93■□□□□ 0.3
NEFM-205ENST00000521540 COG3Q96JB2 828 aa16.93■□□□□ 0.3
NEFM-205ENST00000521540 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
NEFM-205ENST00000521540 TRIM27P14373 513 aa16.92■□□□□ 0.3
NEFM-205ENST00000521540 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
NEFM-205ENST00000521540 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
NEFM-205ENST00000521540 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
NEFM-205ENST00000521540 IL13P35225 146 aa16.9■□□□□ 0.3
NEFM-205ENST00000521540 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
NEFM-205ENST00000521540 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
NEFM-205ENST00000521540 GNAI1P63096 354 aa16.9■□□□□ 0.3
NEFM-205ENST00000521540 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
NEFM-205ENST00000521540 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 BECN1Q14457 450 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 NME9Q86XW9 330 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 USP19O94966 1318 aa16.88■□□□□ 0.29
NEFM-205ENST00000521540 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
NEFM-205ENST00000521540 MST1RQ04912 1400 aa16.87■□□□□ 0.29
NEFM-205ENST00000521540 ATF3P18847 181 aa16.86■□□□□ 0.29
NEFM-205ENST00000521540 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
NEFM-205ENST00000521540 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
NEFM-205ENST00000521540 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
NEFM-205ENST00000521540 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
NEFM-205ENST00000521540 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
NEFM-205ENST00000521540 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
NEFM-205ENST00000521540 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
NEFM-205ENST00000521540 C1orf167Q5SNV9 1468 aa16.84■□□□□ 0.29
NEFM-205ENST00000521540 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
NEFM-205ENST00000521540 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
NEFM-205ENST00000521540 HMOX1P09601 288 aa16.83■□□□□ 0.28
NEFM-205ENST00000521540 RGPD8O14715 1765 aaPredicted RBP16.83■□□□□ 0.28
NEFM-205ENST00000521540 VAMP4O75379 141 aa16.82■□□□□ 0.28
NEFM-205ENST00000521540 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
NEFM-205ENST00000521540 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
NEFM-205ENST00000521540 MRPL50Q8N5N7 158 aaKnown RBP16.82■□□□□ 0.28
NEFM-205ENST00000521540 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
NEFM-205ENST00000521540 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
NEFM-205ENST00000521540 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 FBLN1P23142 703 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 TBC1D32Q96NH3 1257 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 SLAIN2Q9P270 581 aa16.81■□□□□ 0.28
NEFM-205ENST00000521540 TOM1O60784 492 aa16.8■□□□□ 0.28
NEFM-205ENST00000521540 SEC24BO95487 1268 aa16.8■□□□□ 0.28
NEFM-205ENST00000521540 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
NEFM-205ENST00000521540 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
NEFM-205ENST00000521540 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
NEFM-205ENST00000521540 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
NEFM-205ENST00000521540 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
NEFM-205ENST00000521540 UBAP1LF5GYI3 381 aa16.79■□□□□ 0.28
NEFM-205ENST00000521540 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
NEFM-205ENST00000521540 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
NEFM-205ENST00000521540 USP6P35125 1406 aa16.78■□□□□ 0.28
NEFM-205ENST00000521540 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
NEFM-205ENST00000521540 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
NEFM-205ENST00000521540 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
NEFM-205ENST00000521540 ACEP12821 1306 aa16.77■□□□□ 0.28
NEFM-205ENST00000521540 NUCB1Q02818 461 aa16.77■□□□□ 0.27
NEFM-205ENST00000521540 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.27
NEFM-205ENST00000521540 TWISTNBQ3B726 338 aaPredicted RBP16.77■□□□□ 0.27
NEFM-205ENST00000521540 GCC1Q96CN9 775 aa16.77■□□□□ 0.27
NEFM-205ENST00000521540 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms