RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
TRIM35-204ENST00000521283 NWD2Q9ULI1 1742 aa14.41□□□□□ -0.1
TRIM35-204ENST00000521283 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
TRIM35-204ENST00000521283 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
TRIM35-204ENST00000521283 ATAD2Q6PL18 1390 aa14.41□□□□□ -0.1
TRIM35-204ENST00000521283 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
TRIM35-204ENST00000521283 PCGF6Q9BYE7 350 aa14.4□□□□□ -0.1
TRIM35-204ENST00000521283 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
TRIM35-204ENST00000521283 SLIT2O94813 1529 aa14.4□□□□□ -0.1
TRIM35-204ENST00000521283 ABCA3Q99758 1704 aa14.39□□□□□ -0.11
TRIM35-204ENST00000521283 C7P10643 843 aa14.39□□□□□ -0.11
TRIM35-204ENST00000521283 ATRNO75882 1429 aa14.39□□□□□ -0.11
TRIM35-204ENST00000521283 BCL9LQ86UU0 1499 aa14.38□□□□□ -0.11
TRIM35-204ENST00000521283 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
TRIM35-204ENST00000521283 PYGBP11216 843 aa14.38□□□□□ -0.11
TRIM35-204ENST00000521283 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
TRIM35-204ENST00000521283 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
TRIM35-204ENST00000521283 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
TRIM35-204ENST00000521283 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
TRIM35-204ENST00000521283 CABLES1Q8TDN4 633 aa14.36□□□□□ -0.11
TRIM35-204ENST00000521283 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
TRIM35-204ENST00000521283 VPS72Q15906 364 aa14.35□□□□□ -0.11
TRIM35-204ENST00000521283 USP6P35125 1406 aa14.34□□□□□ -0.11
TRIM35-204ENST00000521283 PLCH1Q4KWH8 1693 aa14.34□□□□□ -0.11
TRIM35-204ENST00000521283 CRYBG1Q9Y4K1 1723 aa14.34□□□□□ -0.11
TRIM35-204ENST00000521283 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
TRIM35-204ENST00000521283 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
TRIM35-204ENST00000521283 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
TRIM35-204ENST00000521283 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
TRIM35-204ENST00000521283 POTEFA5A3E0 1075 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 GSE1Q14687 1217 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 CDCA8Q53HL2 280 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 CCER1Q8TC90 406 aaPredicted RBP14.32□□□□□ -0.12
TRIM35-204ENST00000521283 PRDM11Q9NQV5 511 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
TRIM35-204ENST00000521283 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 RGS12O14924 1447 aa14.32□□□□□ -0.12
TRIM35-204ENST00000521283 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
TRIM35-204ENST00000521283 TERF2IPQ9NYB0 399 aa14.31□□□□□ -0.12
TRIM35-204ENST00000521283 USP19O94966 1318 aa14.31□□□□□ -0.12
TRIM35-204ENST00000521283 CPDO75976 1380 aa14.31□□□□□ -0.12
TRIM35-204ENST00000521283 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
TRIM35-204ENST00000521283 ST20-MTHFSA0A0A6YYL1 179 aa14.3□□□□□ -0.12
TRIM35-204ENST00000521283 ONECUT3O60422 494 aaPredicted RBP14.3□□□□□ -0.12
TRIM35-204ENST00000521283 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
TRIM35-204ENST00000521283 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
TRIM35-204ENST00000521283 BTG4Q9NY30 223 aa14.3□□□□□ -0.12
TRIM35-204ENST00000521283 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
TRIM35-204ENST00000521283 GCP02774 474 aa14.29□□□□□ -0.12
TRIM35-204ENST00000521283 NLRP6P59044 892 aa14.29□□□□□ -0.12
TRIM35-204ENST00000521283 TMF1P82094 1093 aa14.29□□□□□ -0.12
TRIM35-204ENST00000521283 CCDC125Q86Z20 511 aa14.29□□□□□ -0.12
TRIM35-204ENST00000521283 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
TRIM35-204ENST00000521283 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
TRIM35-204ENST00000521283 KIAA0232Q92628 1395 aa14.28□□□□□ -0.12
TRIM35-204ENST00000521283 TESK2Q96S53 571 aa14.28□□□□□ -0.12
TRIM35-204ENST00000521283 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
TRIM35-204ENST00000521283 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
TRIM35-204ENST00000521283 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.12
TRIM35-204ENST00000521283 NRAPQ86VF7 1730 aa14.27□□□□□ -0.12
TRIM35-204ENST00000521283 USP47Q96K76 1375 aa14.27□□□□□ -0.12
TRIM35-204ENST00000521283 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.12
TRIM35-204ENST00000521283 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.139e-7■■■■■ 38.6
TRIM35-204ENST00000521283 PCDHB8Q9UN66 801 aa14.27□□□□□ -0.13
TRIM35-204ENST00000521283 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
TRIM35-204ENST00000521283 TMC1Q8TDI8 760 aa14.26□□□□□ -0.13
TRIM35-204ENST00000521283 GLI3P10071 1580 aa14.26□□□□□ -0.13
TRIM35-204ENST00000521283 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
TRIM35-204ENST00000521283 EVA1CP58658 441 aa14.25□□□□□ -0.13
TRIM35-204ENST00000521283 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
TRIM35-204ENST00000521283 TMEM106CQ9BVX2 250 aa14.25□□□□□ -0.13
TRIM35-204ENST00000521283 SLIT3O75094 1523 aa14.25□□□□□ -0.13
TRIM35-204ENST00000521283 PIK3C2AO00443 1686 aa14.24□□□□□ -0.13
TRIM35-204ENST00000521283 SPATA31A5Q5VU36 1347 aa14.24□□□□□ -0.13
TRIM35-204ENST00000521283 SPATA31A7Q8IWB4 1347 aa14.24□□□□□ -0.13
TRIM35-204ENST00000521283 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
TRIM35-204ENST00000521283 USP31Q70CQ4 1352 aa14.23□□□□□ -0.13
TRIM35-204ENST00000521283 CHRM1P11229 460 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-204ENST00000521283 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
TRIM35-204ENST00000521283 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-204ENST00000521283 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
TRIM35-204ENST00000521283 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
TRIM35-204ENST00000521283 SLC12A5Q9H2X9 1139 aa14.22□□□□□ -0.13
TRIM35-204ENST00000521283 USP54Q70EL1 1684 aa14.22□□□□□ -0.13
TRIM35-204ENST00000521283 ABCC6O95255 1503 aa14.21□□□□□ -0.13
TRIM35-204ENST00000521283 LMO7Q8WWI1 1683 aa14.21□□□□□ -0.13
TRIM35-204ENST00000521283 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 CD163L1Q9NR16 1453 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 C11orf95C9JLR9 678 aaPredicted RBP14.2□□□□□ -0.14
TRIM35-204ENST00000521283 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 BARGINQ6ZT62 677 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 KRT27Q7Z3Y8 459 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 ANKRD36BQ8N2N9 1353 aa14.2□□□□□ -0.14
TRIM35-204ENST00000521283 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
TRIM35-204ENST00000521283 BRWD3Q6RI45 1802 aa14.19□□□□□ -0.14
TRIM35-204ENST00000521283 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
TRIM35-204ENST00000521283 CAMTA1Q9Y6Y1 1673 aa14.18□□□□□ -0.14
TRIM35-204ENST00000521283 A0A0G2JS52 829 aa14.18□□□□□ -0.14
TRIM35-204ENST00000521283 EIF4G2P78344 907 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRIM35-204ENST00000521283 MYT1Q01538 1121 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms