RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-213	ENST00000521214	CPS1	P31327	1500 aa		10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	NLRP2	Q9NX02	1062 aa		10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	EXOSC9	Q06265	439 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	TMPO	P42166	694 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	COG6	Q9Y2V7	657 aa		10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	MYOM1	P52179	1685 aa		10.16	□□□□□ -0.78
SPIDR-213	ENST00000521214	SETBP1	Q9Y6X0	1596 aa		10.15	□□□□□ -0.78
SPIDR-213	ENST00000521214	ADAMTS2	O95450	1211 aa		10.15	□□□□□ -0.79
SPIDR-213	ENST00000521214	NFKBIB	Q15653	356 aa		10.15	□□□□□ -0.79
SPIDR-213	ENST00000521214	C19orf44	Q9H6X5	657 aa		10.15	□□□□□ -0.79
SPIDR-213	ENST00000521214	NRXN3	Q9Y4C0	1643 aa		10.14	□□□□□ -0.79
SPIDR-213	ENST00000521214	RRP1	P56182	461 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-213	ENST00000521214	CD163L1	Q9NR16	1453 aa		10.14	□□□□□ -0.79
SPIDR-213	ENST00000521214	MYO3A	Q8NEV4	1616 aa		10.14	□□□□□ -0.79
SPIDR-213	ENST00000521214	DUSP27	Q5VZP5	1158 aa		10.14	□□□□□ -0.79
SPIDR-213	ENST00000521214	NKTR	P30414	1462 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-213	ENST00000521214	SMC4	Q9NTJ3	1288 aa		10.13	□□□□□ -0.79
SPIDR-213	ENST00000521214	RGS3	P49796	1198 aa		10.13	□□□□□ -0.79
SPIDR-213	ENST00000521214	GOLGB1	Q14789	3259 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	ATP7B	P35670	1465 aa		10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	DDRGK1	Q96HY6	314 aa		10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	EYA1	Q99502	592 aa		10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	CCDC9	Q9Y3X0	531 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	KIAA1210	Q9ULL0	1709 aa		10.12	□□□□□ -0.79
SPIDR-213	ENST00000521214	GC	P02774	474 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	SLFN5	Q08AF3	891 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	SRCAP	Q6ZRS2	3230 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	RGPD8	O14715	1765 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	PLEKHG3	A1L390	1219 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	TSPYL6	Q8N831	410 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	APBB1	O00213	710 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	NGEF	Q8N5V2	710 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	RTF1	Q92541	710 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	AXIN2	Q9Y2T1	843 aa		10.11	□□□□□ -0.79
SPIDR-213	ENST00000521214	IL13	P35225	146 aa		10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	MPRIP	Q6WCQ1	1025 aa		10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	EIF2S2	P20042	333 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	SLC4A3	P48751	1232 aa		10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	USP6	P35125	1406 aa		10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	PRDM11	Q9NQV5	511 aa		10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	EDC4	Q6P2E9	1401 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-213	ENST00000521214	FTSJ3	Q8IY81	847 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	SLAIN2	Q9P270	581 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	TRIM35	Q9UPQ4	493 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214		E9PSI1	815 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	ANXA1	P04083	346 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	PIP4K2A	P48426	406 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	NBPF6	Q5VWK0	638 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	NBPF4	Q96M43	638 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	POLR3A	O14802	1390 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	HOXC9	P31274	260 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	MTHFSD	Q2M296	383 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	C1orf115	Q9H7X2	142 aa		10.09	□□□□□ -0.79
SPIDR-213	ENST00000521214	FAM135B	Q49AJ0	1406 aa		10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	SLC4A10	Q6U841	1118 aa		10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	DDX54	Q8TDD1	881 aa	Known RBP	10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	MSH6	P52701	1360 aa		10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	CADPS2	Q86UW7	1296 aa		10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	ITPRIP	Q8IWB1	547 aa		10.08	□□□□□ -0.8
SPIDR-213	ENST00000521214	ARHGAP23	Q9P227	1491 aa		10.07	□□□□□ -0.8
SPIDR-213	ENST00000521214	EVA1C	P58658	441 aa		10.07	□□□□□ -0.8
SPIDR-213	ENST00000521214	ARID3A	Q99856	593 aa		10.07	□□□□□ -0.8
SPIDR-213	ENST00000521214	BBX	Q8WY36	941 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-213	ENST00000521214	SMG6	Q86US8	1419 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-213	ENST00000521214	FCHSD2	O94868	740 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	DIP2A	Q14689	1571 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	ANKRD24	Q8TF21	1146 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	SYTL4	Q96C24	671 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	NFE2L2	Q16236	605 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	BRINP3	Q76B58	766 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	CPSF1	Q10570	1443 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	RLBP1	P12271	317 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	TOM1L2	Q6ZVM7	507 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	C8orf58	Q8NAV2	365 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	SSH1	Q8WYL5	1049 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	PLEKHF1	Q96S99	279 aa		10.06	□□□□□ -0.8
SPIDR-213	ENST00000521214	SLIT1	O75093	1534 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	MYH16	Q9H6N6	1097 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	TSPYL4	Q9UJ04	414 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	PDE3B	Q13370	1112 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	LGR6	Q9HBX8	967 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	MBIP	Q9NS73	344 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	NINL	Q9Y2I6	1382 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	PDE4A	P27815	886 aa		10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	PUS7	Q96PZ0	661 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-213	ENST00000521214	ADAMTSL3	P82987	1691 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	MAP2	P11137	1827 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	NPC1L1	Q9UHC9	1359 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	SLC39A6	Q13433	755 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	L1TD1	Q5T7N2	865 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	SIRT1	Q96EB6	747 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	NOB1	Q9ULX3	412 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	NSD2	O96028	1365 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	UBAP1L	F5GYI3	381 aa		10.04	□□□□□ -0.8
SPIDR-213	ENST00000521214	BLM	P54132	1417 aa	Predicted RBP	10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms