RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CT47B1P0C2W7 299 aaPredicted RBP14.33□□□□□ -0.12
CLK4-206ENST00000520878 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
CLK4-206ENST00000520878 C8orf58Q8NAV2 365 aa14.32□□□□□ -0.12
CLK4-206ENST00000520878 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
CLK4-206ENST00000520878 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
CLK4-206ENST00000520878 FOXO3O43524 673 aa14.32□□□□□ -0.12
CLK4-206ENST00000520878 TBX22Q9Y458 520 aa14.32□□□□□ -0.12
CLK4-206ENST00000520878 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
CLK4-206ENST00000520878 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
CLK4-206ENST00000520878 BECN1Q14457 450 aa14.3□□□□□ -0.12
CLK4-206ENST00000520878 ARHGEF40Q8TER5 1519 aa14.3□□□□□ -0.12
CLK4-206ENST00000520878 MYO5BQ9ULV0 1848 aa14.3□□□□□ -0.12
CLK4-206ENST00000520878 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
CLK4-206ENST00000520878 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
CLK4-206ENST00000520878 STK31Q9BXU1 1019 aa14.29□□□□□ -0.12
CLK4-206ENST00000520878 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
CLK4-206ENST00000520878 PROSER2Q86WR7 435 aaPredicted RBP14.29□□□□□ -0.12
CLK4-206ENST00000520878 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
CLK4-206ENST00000520878 IL16Q14005 1332 aa14.28□□□□□ -0.12
CLK4-206ENST00000520878 VAMP4O75379 141 aa14.28□□□□□ -0.12
CLK4-206ENST00000520878 EIF2S2P20042 333 aaKnown RBP14.28□□□□□ -0.12
CLK4-206ENST00000520878 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
CLK4-206ENST00000520878 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
CLK4-206ENST00000520878 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
CLK4-206ENST00000520878 C8orf34Q49A92 452 aa14.28□□□□□ -0.12
CLK4-206ENST00000520878 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
CLK4-206ENST00000520878 HSP90AA1P07900 732 aaKnown RBP14.28□□□□□ -0.12
CLK4-206ENST00000520878 AGLP35573 1532 aa14.27□□□□□ -0.12
CLK4-206ENST00000520878 IFT172Q9UG01 1749 aa14.27□□□□□ -0.12
CLK4-206ENST00000520878 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.13
CLK4-206ENST00000520878 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
CLK4-206ENST00000520878 PLEKHG3A1L390 1219 aa14.26□□□□□ -0.13
CLK4-206ENST00000520878 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
CLK4-206ENST00000520878 AAMPQ13685 434 aa14.26□□□□□ -0.13
CLK4-206ENST00000520878 ARHGEF28Q8N1W1 1705 aaKnown RBP14.26□□□□□ -0.13
CLK4-206ENST00000520878 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
CLK4-206ENST00000520878 SEC24BO95487 1268 aa14.25□□□□□ -0.13
CLK4-206ENST00000520878 ARXQ96QS3 562 aa14.25□□□□□ -0.13
CLK4-206ENST00000520878 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
CLK4-206ENST00000520878 FKBP5Q13451 457 aaPredicted RBP14.24□□□□□ -0.13
CLK4-206ENST00000520878 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
CLK4-206ENST00000520878 EYA1Q99502 592 aa14.24□□□□□ -0.13
CLK4-206ENST00000520878 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
CLK4-206ENST00000520878 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
CLK4-206ENST00000520878 F6X3S4 739 aa14.23□□□□□ -0.13
CLK4-206ENST00000520878 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
CLK4-206ENST00000520878 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
CLK4-206ENST00000520878 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
CLK4-206ENST00000520878 ATP7BP35670 1465 aa14.23□□□□□ -0.13
CLK4-206ENST00000520878 ZC3H6P61129 1189 aaKnown RBP14.22□□□□□ -0.13
CLK4-206ENST00000520878 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
CLK4-206ENST00000520878 TEFQ10587 303 aa14.22□□□□□ -0.13
CLK4-206ENST00000520878 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
CLK4-206ENST00000520878 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
CLK4-206ENST00000520878 ZBTB40Q9NUA8 1239 aa14.2□□□□□ -0.14
CLK4-206ENST00000520878 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
CLK4-206ENST00000520878 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
CLK4-206ENST00000520878 TTC21AQ8NDW8 1320 aa14.2□□□□□ -0.14
CLK4-206ENST00000520878 ADAMTS13Q76LX8 1427 aa14.19□□□□□ -0.14
CLK4-206ENST00000520878 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
CLK4-206ENST00000520878 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
CLK4-206ENST00000520878 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
CLK4-206ENST00000520878 ATF3P18847 181 aa14.18□□□□□ -0.14
CLK4-206ENST00000520878 CPS1P31327 1500 aa14.18□□□□□ -0.14
CLK4-206ENST00000520878 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
CLK4-206ENST00000520878 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
CLK4-206ENST00000520878 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 NLRP2Q9NX02 1062 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
CLK4-206ENST00000520878 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 USP6P35125 1406 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 HOXC9P31274 260 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 FLT4P35916 1363 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
CLK4-206ENST00000520878 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
CLK4-206ENST00000520878 ZBTB7BO15156 539 aaPredicted RBP14.16□□□□□ -0.14
CLK4-206ENST00000520878 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
CLK4-206ENST00000520878 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 HDAC1Q13547 482 aaPredicted RBP14.15□□□□□ -0.14
CLK4-206ENST00000520878 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 A0A0G2JS52 829 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
CLK4-206ENST00000520878 G2E3Q7L622 706 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
CLK4-206ENST00000520878 HMMRO75330 724 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
CLK4-206ENST00000520878 CHL1O00533 1208 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 HSPA2P54652 639 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 DDX17Q92841 729 aaKnown RBP14.14□□□□□ -0.15
CLK4-206ENST00000520878 MEIS3Q99687 375 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 HSP90AB1P08238 724 aaKnown RBP14.14□□□□□ -0.15
CLK4-206ENST00000520878 NFKBIBQ15653 356 aa14.14□□□□□ -0.15
CLK4-206ENST00000520878 ANXA1P04083 346 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 LRRC7Q96NW7 1537 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 DLC1Q96QB1 1528 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms