RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
PCDHA2-202ENST00000520672 PLEKHF1Q96S99 279 aa17.46■□□□□ 0.38
PCDHA2-202ENST00000520672 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 RARSP54136 660 aaKnown RBP17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 ADAMTS13Q76LX8 1427 aa17.45■□□□□ 0.38
PCDHA2-202ENST00000520672 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 TPM2P07951 284 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
PCDHA2-202ENST00000520672 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
PCDHA2-202ENST00000520672 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
PCDHA2-202ENST00000520672 RLBP1P12271 317 aa17.42■□□□□ 0.38
PCDHA2-202ENST00000520672 KCNA6P17658 529 aa17.42■□□□□ 0.38
PCDHA2-202ENST00000520672 SEC24BO95487 1268 aa17.41■□□□□ 0.38
PCDHA2-202ENST00000520672 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
PCDHA2-202ENST00000520672 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
PCDHA2-202ENST00000520672 PTPRUQ92729 1446 aa17.4■□□□□ 0.38
PCDHA2-202ENST00000520672 IGHDP01880 384 aa17.4■□□□□ 0.38
PCDHA2-202ENST00000520672 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
PCDHA2-202ENST00000520672 FAM83GA6ND36 823 aa17.39■□□□□ 0.38
PCDHA2-202ENST00000520672 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.38
PCDHA2-202ENST00000520672 USP32Q8NFA0 1604 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 TRIM44Q96DX7 344 aaPredicted RBP17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 CPS1P31327 1500 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 UBR1Q8IWV7 1749 aa17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
PCDHA2-202ENST00000520672 FCHSD2O94868 740 aa17.38■□□□□ 0.37
PCDHA2-202ENST00000520672 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
PCDHA2-202ENST00000520672 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
PCDHA2-202ENST00000520672 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
PCDHA2-202ENST00000520672 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
PCDHA2-202ENST00000520672 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
PCDHA2-202ENST00000520672 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
PCDHA2-202ENST00000520672 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
PCDHA2-202ENST00000520672 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
PCDHA2-202ENST00000520672 ATP7BP35670 1465 aa17.37■□□□□ 0.37
PCDHA2-202ENST00000520672 IL13P35225 146 aa17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
PCDHA2-202ENST00000520672 SIRT1Q96EB6 747 aa17.35■□□□□ 0.37
PCDHA2-202ENST00000520672 USP19O94966 1318 aa17.35■□□□□ 0.37
PCDHA2-202ENST00000520672 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
PCDHA2-202ENST00000520672 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
PCDHA2-202ENST00000520672 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.37
PCDHA2-202ENST00000520672 PDE3AQ14432 1141 aa17.33■□□□□ 0.37
PCDHA2-202ENST00000520672 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
PCDHA2-202ENST00000520672 NLRP6P59044 892 aa17.33■□□□□ 0.36
PCDHA2-202ENST00000520672 C3P01024 1663 aa17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 TECPR2O15040 1411 aa17.32■□□□□ 0.36
PCDHA2-202ENST00000520672 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 IPO4Q8TEX9 1081 aaKnown RBP17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
PCDHA2-202ENST00000520672 AMPHP49418 695 aa17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 MED14O60244 1454 aa17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
PCDHA2-202ENST00000520672 FSD2A1L4K1 749 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 ZNF830Q96NB3 372 aaPredicted RBP17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 FER1L4A9Z1Z3 1794 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 BECN1Q14457 450 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 DZIP1LQ8IYY4 767 aaKnown RBP17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 TRIM27P14373 513 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 MCM10Q7L590 875 aa17.29■□□□□ 0.36
PCDHA2-202ENST00000520672 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
PCDHA2-202ENST00000520672 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.36
PCDHA2-202ENST00000520672 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
PCDHA2-202ENST00000520672 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
PCDHA2-202ENST00000520672 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.36
PCDHA2-202ENST00000520672 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 CDC42BPGQ6DT37 1551 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 PPP4R3BQ5MIZ7 849 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 USP6P35125 1406 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 FOXO3O43524 673 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
PCDHA2-202ENST00000520672 MRE11P49959 708 aa17.25■□□□□ 0.35
PCDHA2-202ENST00000520672 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
PCDHA2-202ENST00000520672 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms