RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 KNSTRNQ9Y448 316 aa7.68□□□□□ -1.18
CTNNA1-220ENST00000520260 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
CTNNA1-220ENST00000520260 CPSF1Q10570 1443 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-220ENST00000520260 SMG6Q86US8 1419 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-220ENST00000520260 SPNS2Q8IVW8 549 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 MIER1Q8N108 512 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 C8orf37Q96NL8 207 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 TRPC5Q9UL62 973 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 A0A1W2PP64 1363 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 ABCC6O95255 1503 aa7.66□□□□□ -1.18
CTNNA1-220ENST00000520260 C11orf95C9JLR9 678 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-220ENST00000520260 RGPD8O14715 1765 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-220ENST00000520260 ATMINO43313 823 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-220ENST00000520260 ADAMTS2O95450 1211 aa7.65□□□□□ -1.18
CTNNA1-220ENST00000520260 EVA1CP58658 441 aa7.65□□□□□ -1.18
CTNNA1-220ENST00000520260 AKAP12Q02952 1782 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 MON2Q7Z3U7 1717 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 CPDO75976 1380 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 KIF24Q5T7B8 1368 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 USP31Q70CQ4 1352 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 USP19O94966 1318 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 WASHC2AQ641Q2 1341 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 DDX17Q92841 729 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 SLC12A5Q9H2X9 1139 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 USP21Q9UK80 565 aa7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 CCDC9Q9Y3X0 531 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 TRPM3Q9HCF6 1732 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-220ENST00000520260 ALS2Q96Q42 1657 aa7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 RTL1A6NKG5 1358 aa7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 AFF2P51816 1311 aa7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 GCP02774 474 aa7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 RXRBP28702 533 aa7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 CDCA7Q9BWT1 371 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 COL14A1Q05707 1796 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-220ENST00000520260 NSD3Q9BZ95 1437 aa7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 CSB-PGBD3P0DP91 1061 aa7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 AMPHP49418 695 aa7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 RBM6P78332 1123 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 UNC5CLQ8IV45 518 aa7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
CTNNA1-220ENST00000520260 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 NWD2Q9ULI1 1742 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 AATKQ6ZMQ8 1374 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 CCDC7Q96M83 1385 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 KIF7Q2M1P5 1343 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 A0A0G2JS52 829 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 ZBTB7CA1YPR0 619 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 PLEKHG5O94827 1062 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 HMGB2P26583 209 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 MORC1Q86VD1 984 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 THRAP3Q9Y2W1 955 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 NRKQ7Z2Y5 1582 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 SLIT3O75094 1523 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 CDK12Q9NYV4 1490 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 MARF1Q9Y4F3 1742 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
CTNNA1-220ENST00000520260 KIAA0232Q92628 1395 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 ZC3H6P61129 1189 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 NUTM2GQ5VZR2 741 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 CFAP53Q96M91 514 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 YTHDC1Q96MU7 727 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 PANK3Q9H999 370 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 USP54Q70EL1 1684 aa7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-220ENST00000520260 NPC1L1Q9UHC9 1359 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 NEFMP07197 916 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 VPS72Q15906 364 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 NME9Q86XW9 330 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 CABLES1Q8TDN4 633 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 QTRT2Q9H974 415 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 CREBZFQ9NS37 354 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 CD163L1Q9NR16 1453 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 PIK3C2AO00443 1686 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 OVOS2A0A0J9YW53 1432 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 OVOS2Q6IE36 1432 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 LRP6O75581 1613 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 KIF20BQ96Q89 1820 aa7.59□□□□□ -1.19
CTNNA1-220ENST00000520260 FLT4P35916 1363 aa7.59□□□□□ -1.2
CTNNA1-220ENST00000520260 ABCA3Q99758 1704 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 SLIT2O94813 1529 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 POTEFA5A3E0 1075 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 SOX12O15370 315 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 ANP32EQ9BTT0 268 aa7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-220ENST00000520260 MYOM1P52179 1685 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 FYB1O15117 783 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 ATXN8OSP0DMR3 200 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 SF3B2Q13435 895 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 ARHGEF25Q86VW2 580 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 TCP11L2Q8N4U5 519 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 MS4A3Q96HJ5 214 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 GGNBP2Q9H3C7 697 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 STRN4Q9NRL3 753 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 CRB1P82279 1406 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms