RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
TRPS1-210ENST00000519815 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
TRPS1-210ENST00000519815 SOX12O15370 315 aa13.86□□□□□ -0.19
TRPS1-210ENST00000519815 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
TRPS1-210ENST00000519815 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
TRPS1-210ENST00000519815 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
TRPS1-210ENST00000519815 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
TRPS1-210ENST00000519815 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
TRPS1-210ENST00000519815 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
TRPS1-210ENST00000519815 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
TRPS1-210ENST00000519815 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
TRPS1-210ENST00000519815 AMPHP49418 695 aa13.83□□□□□ -0.2
TRPS1-210ENST00000519815 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.2
TRPS1-210ENST00000519815 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
TRPS1-210ENST00000519815 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.2
TRPS1-210ENST00000519815 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 PXDNQ92626 1479 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 GCP02774 474 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 IL13P35225 146 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 USP19O94966 1318 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
TRPS1-210ENST00000519815 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
TRPS1-210ENST00000519815 TOM1O60784 492 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 RUNDC1Q96C34 613 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 FLT4P35916 1363 aa13.81□□□□□ -0.2
TRPS1-210ENST00000519815 FCHSD2O94868 740 aa13.8□□□□□ -0.2
TRPS1-210ENST00000519815 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
TRPS1-210ENST00000519815 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
TRPS1-210ENST00000519815 SHPRHQ149N8 1683 aa13.79□□□□□ -0.2
TRPS1-210ENST00000519815 HOXC9P31274 260 aa13.79□□□□□ -0.2
TRPS1-210ENST00000519815 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
TRPS1-210ENST00000519815 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
TRPS1-210ENST00000519815 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 APAF1O14727 1248 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 ARHGEF25Q86VW2 580 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 IP6K1Q92551 441 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 SLIT3O75094 1523 aa13.78□□□□□ -0.2
TRPS1-210ENST00000519815 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
TRPS1-210ENST00000519815 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
TRPS1-210ENST00000519815 MARF1Q9Y4F3 1742 aaKnown RBP13.77□□□□□ -0.21
TRPS1-210ENST00000519815 NFAT5O94916 1531 aa13.76□□□□□ -0.21
TRPS1-210ENST00000519815 NEFMP07197 916 aa13.76□□□□□ -0.21
TRPS1-210ENST00000519815 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRPS1-210ENST00000519815 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
TRPS1-210ENST00000519815 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
TRPS1-210ENST00000519815 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
TRPS1-210ENST00000519815 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
TRPS1-210ENST00000519815 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
TRPS1-210ENST00000519815 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
TRPS1-210ENST00000519815 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
TRPS1-210ENST00000519815 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
TRPS1-210ENST00000519815 PEAK1Q9H792 1746 aa13.74□□□□□ -0.21
TRPS1-210ENST00000519815 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
TRPS1-210ENST00000519815 HMOX1P09601 288 aa13.74□□□□□ -0.21
TRPS1-210ENST00000519815 ZC3H6P61129 1189 aaKnown RBP13.74□□□□□ -0.21
TRPS1-210ENST00000519815 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
TRPS1-210ENST00000519815 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
TRPS1-210ENST00000519815 PRKAR2BP31323 418 aa13.73□□□□□ -0.21
TRPS1-210ENST00000519815 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
TRPS1-210ENST00000519815 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
TRPS1-210ENST00000519815 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
TRPS1-210ENST00000519815 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
TRPS1-210ENST00000519815 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
TRPS1-210ENST00000519815 LTV1Q96GA3 475 aaPredicted RBP13.72□□□□□ -0.21
TRPS1-210ENST00000519815 EYA1Q99502 592 aa13.72□□□□□ -0.21
TRPS1-210ENST00000519815 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
TRPS1-210ENST00000519815 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
TRPS1-210ENST00000519815 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.21
TRPS1-210ENST00000519815 AHDC1Q5TGY3 1603 aaPredicted RBP13.71□□□□□ -0.22
TRPS1-210ENST00000519815 CPDO75976 1380 aa13.71□□□□□ -0.22
TRPS1-210ENST00000519815 IGSF1Q8N6C5 1336 aa13.7□□□□□ -0.22
TRPS1-210ENST00000519815 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
TRPS1-210ENST00000519815 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
TRPS1-210ENST00000519815 NEUROD2Q15784 382 aa13.7□□□□□ -0.22
TRPS1-210ENST00000519815 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
TRPS1-210ENST00000519815 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
TRPS1-210ENST00000519815 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
TRPS1-210ENST00000519815 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
TRPS1-210ENST00000519815 ANKRD24Q8TF21 1146 aa13.69□□□□□ -0.22
TRPS1-210ENST00000519815 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
TRPS1-210ENST00000519815 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
TRPS1-210ENST00000519815 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
TRPS1-210ENST00000519815 RIPK4P57078 832 aa13.68□□□□□ -0.22
TRPS1-210ENST00000519815 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
TRPS1-210ENST00000519815 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
TRPS1-210ENST00000519815 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
TRPS1-210ENST00000519815 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
TRPS1-210ENST00000519815 PRDM11Q9NQV5 511 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms