RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 NLRP13Q86W25 1043 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 ABTB2Q8N961 1025 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 MARCH10Q8NA82 808 aaPredicted RBP7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 NLGN2Q8NFZ4 835 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 PEAK1Q9H792 1746 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 ADCY9O60503 1353 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 BRD4O60885 1362 aaPredicted RBP7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 PTF1AQ7RTS3 328 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 JMYQ8N9B5 988 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 KLRG1Q96E93 195 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 HIRIP3Q9BW71 556 aaPredicted RBP7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 WWC3Q9ULE0 1092 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 GOLGB1Q14789 3259 aaKnown RBP7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 CRYBG1Q9Y4K1 1723 aa7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 PHRF1Q9P1Y6 1649 aaKnown RBP7.37□□□□□ -1.23
AC055854.1-202ENST00000519624 RGPD8O14715 1765 aaPredicted RBP7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 PRR36Q9H6K5 1346 aa7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 KIF3CO14782 793 aa7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 GCP02774 474 aa7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 SLC27A3Q5K4L6 730 aa7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 TFCP2L1Q9NZI6 479 aa7.36□□□□□ -1.23
AC055854.1-202ENST00000519624 LRRC37A3O60309 1634 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 USP19O94966 1318 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 MINK1Q8N4C8 1332 aaPredicted RBP7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 HMGB2P26583 209 aaKnown RBP7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 CFAP70Q5T0N1 1121 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 C16orf71Q8IYS4 520 aaPredicted RBP7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 CD2APQ9Y5K6 639 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 LMO7Q8WWI1 1683 aa7.35□□□□□ -1.23
AC055854.1-202ENST00000519624 WDR17Q8IZU2 1322 aa7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 ZNF827Q17R98 1081 aa7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 NUDT16Q96DE0 195 aaKnown RBP7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 TRAK1Q9UPV9 953 aa7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 TOPAZ1Q8N9V7 1692 aa7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 SPATA31E1Q6ZUB1 1445 aa7.34□□□□□ -1.23
AC055854.1-202ENST00000519624 MSH5O43196 834 aa7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 FSTL1Q12841 308 aa7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 AKT1S1Q96B36 256 aa7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 CARD10Q9BWT7 1032 aa7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
AC055854.1-202ENST00000519624 ACEP12821 1306 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 PNPLA7Q6ZV29 1317 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 LOC105371045A0A1W2PR82 267 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 CCDC61Q9Y6R9 512 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 USP6P35125 1406 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 CCDC7Q96M83 1385 aa7.32□□□□□ -1.24
AC055854.1-202ENST00000519624 SBF2Q86WG5 1849 aa7.31□□□□□ -1.24
AC055854.1-202ENST00000519624 PAPPAQ13219 1627 aa7.31□□□□□ -1.24
AC055854.1-202ENST00000519624 TNS2Q63HR2 1409 aa7.31□□□□□ -1.24
AC055854.1-202ENST00000519624 ACSBG1Q96GR2 724 aa7.31□□□□□ -1.24
AC055854.1-202ENST00000519624 PLEKHG3A1L390 1219 aa7.3□□□□□ -1.24
AC055854.1-202ENST00000519624 NLRP6P59044 892 aa7.3□□□□□ -1.24
AC055854.1-202ENST00000519624 LRRC4BQ9NT99 713 aa7.3□□□□□ -1.24
AC055854.1-202ENST00000519624 ITSN1Q15811 1721 aa7.3□□□□□ -1.24
AC055854.1-202ENST00000519624 HSPA1AP0DMV8 641 aaKnown RBP7.29□□□□□ -1.24
AC055854.1-202ENST00000519624 HSPA1BP0DMV9 641 aaKnown RBP7.29□□□□□ -1.24
AC055854.1-202ENST00000519624 KCNH5Q8NCM2 988 aa7.29□□□□□ -1.24
AC055854.1-202ENST00000519624 FLAD1Q8NFF5 587 aa7.29□□□□□ -1.24
AC055854.1-202ENST00000519624 AKAP12Q02952 1782 aa7.28□□□□□ -1.24
AC055854.1-202ENST00000519624 CDK19Q9BWU1 502 aa7.28□□□□□ -1.24
AC055854.1-202ENST00000519624 NHSQ6T4R5 1651 aa7.28□□□□□ -1.24
AC055854.1-202ENST00000519624 IGSF1Q8N6C5 1336 aa7.27□□□□□ -1.24
AC055854.1-202ENST00000519624 WDR90Q96KV7 1748 aa7.27□□□□□ -1.25
AC055854.1-202ENST00000519624 ABCC6O95255 1503 aa7.27□□□□□ -1.25
AC055854.1-202ENST00000519624 CPSF1Q10570 1443 aaKnown RBP7.27□□□□□ -1.25
AC055854.1-202ENST00000519624 PPIP5K1Q6PFW1 1433 aa7.27□□□□□ -1.25
AC055854.1-202ENST00000519624 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.25
AC055854.1-202ENST00000519624 PLEKHG2Q9H7P9 1386 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 IL2RBP14784 551 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 HTRA3P83110 453 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 STAC3Q96MF2 364 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 AXIN2Q9Y2T1 843 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 COL24A1Q17RW2 1714 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 QSER1Q2KHR3 1735 aa7.26□□□□□ -1.25
AC055854.1-202ENST00000519624 ARHGEF28Q8N1W1 1705 aaKnown RBP7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 MSL1Q68DK7 614 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 ARHGEF25Q86VW2 580 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 COL23A1Q86Y22 540 aaPredicted RBP7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 SMC1BQ8NDV3 1235 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 SYTL4Q96C24 671 aaPredicted RBP7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 NMRK2Q9NPI5 230 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 CCNL1Q9UK58 526 aaPredicted RBP7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 TRPM1Q7Z4N2 1603 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
AC055854.1-202ENST00000519624 SLIT3O75094 1523 aa7.24□□□□□ -1.25
AC055854.1-202ENST00000519624 SRPK2P78362 688 aaKnown RBP7.24□□□□□ -1.25
AC055854.1-202ENST00000519624 MPHOSPH9Q99550 1183 aa7.24□□□□□ -1.25
AC055854.1-202ENST00000519624 WNK3Q9BYP7 1800 aa7.23□□□□□ -1.25
AC055854.1-202ENST00000519624 FAM161AQ3B820 660 aa7.23□□□□□ -1.25
AC055854.1-202ENST00000519624 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
AC055854.1-202ENST00000519624 USP47Q96K76 1375 aa7.22□□□□□ -1.25
AC055854.1-202ENST00000519624 C10orf71Q711Q0 1435 aa7.22□□□□□ -1.25
AC055854.1-202ENST00000519624 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
AC055854.1-202ENST00000519624 PRDM10Q9NQV6 1147 aa7.22□□□□□ -1.25
AC055854.1-202ENST00000519624 ANKRD36BQ8N2N9 1353 aa7.21□□□□□ -1.25
AC055854.1-202ENST00000519624 NSD3Q9BZ95 1437 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms