RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
CTNNA1-216ENST00000519489 ANKRD30AQ9BXX3 1397 aa10.88□□□□□ -0.67
CTNNA1-216ENST00000519489 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
CTNNA1-216ENST00000519489 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
CTNNA1-216ENST00000519489 PSME1Q06323 249 aa10.87□□□□□ -0.67
CTNNA1-216ENST00000519489 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
CTNNA1-216ENST00000519489 RGPD3A6NKT7 1758 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 RGPD4Q7Z3J3 1758 aa10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 ZNF827Q17R98 1081 aa10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 LARP1Q6PKG0 1096 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 PRDM11Q9NQV5 511 aa10.85□□□□□ -0.67
CTNNA1-216ENST00000519489 KIAA0232Q92628 1395 aa10.84□□□□□ -0.67
CTNNA1-216ENST00000519489 NRXN1Q9ULB1 1477 aa10.84□□□□□ -0.67
CTNNA1-216ENST00000519489 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
CTNNA1-216ENST00000519489 MIER1Q8N108 512 aa10.83□□□□□ -0.68
CTNNA1-216ENST00000519489 PHRF1Q9P1Y6 1649 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-216ENST00000519489 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
CTNNA1-216ENST00000519489 ANKRD50Q9ULJ7 1429 aa10.83□□□□□ -0.68
CTNNA1-216ENST00000519489 WDR90Q96KV7 1748 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 FMN2Q9NZ56 1722 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 TOMM70O94826 608 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 PMFBP1Q8TBY8 1022 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 PHF12Q96QT6 1004 aa10.82□□□□□ -0.68
CTNNA1-216ENST00000519489 AATKQ6ZMQ8 1374 aa10.81□□□□□ -0.68
CTNNA1-216ENST00000519489 TCP11L2Q8N4U5 519 aa10.81□□□□□ -0.68
CTNNA1-216ENST00000519489 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
CTNNA1-216ENST00000519489 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
CTNNA1-216ENST00000519489 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
CTNNA1-216ENST00000519489 STK26Q9P289 416 aa10.8□□□□□ -0.68
CTNNA1-216ENST00000519489 CRYBG1Q9Y4K1 1723 aa10.79□□□□□ -0.68
CTNNA1-216ENST00000519489 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-216ENST00000519489 ATP7BP35670 1465 aa10.79□□□□□ -0.68
CTNNA1-216ENST00000519489 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-216ENST00000519489 PAPPAQ13219 1627 aa10.78□□□□□ -0.68
CTNNA1-216ENST00000519489 ZC3H6P61129 1189 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-216ENST00000519489 NMRK2Q9NPI5 230 aa10.78□□□□□ -0.68
CTNNA1-216ENST00000519489 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
CTNNA1-216ENST00000519489 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
CTNNA1-216ENST00000519489 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
CTNNA1-216ENST00000519489 SBF2Q86WG5 1849 aa10.77□□□□□ -0.69
CTNNA1-216ENST00000519489 DHX57Q6P158 1386 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-216ENST00000519489 LHX8Q68G74 356 aa10.76□□□□□ -0.69
CTNNA1-216ENST00000519489 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-216ENST00000519489 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-216ENST00000519489 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
CTNNA1-216ENST00000519489 PNPLA7Q6ZV29 1317 aa10.75□□□□□ -0.69
CTNNA1-216ENST00000519489 COL24A1Q17RW2 1714 aa10.75□□□□□ -0.69
CTNNA1-216ENST00000519489 POLD1P28340 1107 aa10.74□□□□□ -0.69
CTNNA1-216ENST00000519489 EVA1CP58658 441 aa10.74□□□□□ -0.69
CTNNA1-216ENST00000519489 TMEM132EQ6IEE7 984 aa10.74□□□□□ -0.69
CTNNA1-216ENST00000519489 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-216ENST00000519489 PARP4Q9UKK3 1724 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-216ENST00000519489 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 ABCC11Q96J66 1382 aa10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 BCL9O00512 1426 aa10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 CLTCL1P53675 1640 aa10.73□□□□□ -0.69
CTNNA1-216ENST00000519489 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-216ENST00000519489 THRAP3Q9Y2W1 955 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-216ENST00000519489 LRRC37A3O60309 1634 aa10.71□□□□□ -0.69
CTNNA1-216ENST00000519489 SLC16A10Q8TF71 515 aa10.71□□□□□ -0.69
CTNNA1-216ENST00000519489 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
CTNNA1-216ENST00000519489 PRR36Q9H6K5 1346 aa10.71□□□□□ -0.69
CTNNA1-216ENST00000519489 NUP155O75694 1391 aa10.7□□□□□ -0.7
CTNNA1-216ENST00000519489 DDB1Q16531 1140 aa10.7□□□□□ -0.7
CTNNA1-216ENST00000519489 NUTM2GQ5VZR2 741 aa10.7□□□□□ -0.7
CTNNA1-216ENST00000519489 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
CTNNA1-216ENST00000519489 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
CTNNA1-216ENST00000519489 ADGRF5Q8IZF2 1346 aa10.69□□□□□ -0.7
CTNNA1-216ENST00000519489 RGS19P49795 217 aa10.69□□□□□ -0.7
CTNNA1-216ENST00000519489 MLLT1Q03111 559 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-216ENST00000519489 ARHGEF28Q8N1W1 1705 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-216ENST00000519489 TULP4Q9NRJ4 1543 aa10.68□□□□□ -0.7
CTNNA1-216ENST00000519489 FOXN1O15353 648 aa10.68□□□□□ -0.7
CTNNA1-216ENST00000519489 ABHD8Q96I13 439 aa10.68□□□□□ -0.7
CTNNA1-216ENST00000519489 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
CTNNA1-216ENST00000519489 KCNQ4P56696 695 aa10.67□□□□□ -0.7
CTNNA1-216ENST00000519489 FSTL1Q12841 308 aa10.67□□□□□ -0.7
CTNNA1-216ENST00000519489 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-216ENST00000519489 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
CTNNA1-216ENST00000519489 TOPAZ1Q8N9V7 1692 aa10.66□□□□□ -0.7
CTNNA1-216ENST00000519489 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
CTNNA1-216ENST00000519489 TNRC18O15417 2968 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-216ENST00000519489 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 NUBP1P53384 320 aa10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.7
CTNNA1-216ENST00000519489 IFT172Q9UG01 1749 aa10.64□□□□□ -0.71
CTNNA1-216ENST00000519489 CD2APQ9Y5K6 639 aa10.64□□□□□ -0.71
CTNNA1-216ENST00000519489 CRB1P82279 1406 aa10.64□□□□□ -0.71
CTNNA1-216ENST00000519489 KIAA1210Q9ULL0 1709 aa10.64□□□□□ -0.71
CTNNA1-216ENST00000519489 PRDM10Q9NQV6 1147 aa10.63□□□□□ -0.71
CTNNA1-216ENST00000519489 ANKARQ7Z5J8 1434 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms