RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 NUP155O75694 1391 aa11.79□□□□□ -0.52
CDKL3-203ENST00000519312 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
CDKL3-203ENST00000519312 RGS12O14924 1447 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 PTCH1Q13635 1447 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 NALCNQ8IZF0 1738 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 DMRTA1Q5VZB9 504 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 LRRC59Q96AG4 307 aaKnown RBP11.78□□□□□ -0.52
CDKL3-203ENST00000519312 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
CDKL3-203ENST00000519312 METP08581 1390 aa11.78□□□□□ -0.52
CDKL3-203ENST00000519312 FOSBP53539 338 aa11.77□□□□□ -0.53
CDKL3-203ENST00000519312 CAMK2BQ13554 666 aa11.77□□□□□ -0.53
CDKL3-203ENST00000519312 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
CDKL3-203ENST00000519312 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
CDKL3-203ENST00000519312 AFF2P51816 1311 aa11.77□□□□□ -0.53
CDKL3-203ENST00000519312 PTGER2P43116 358 aa11.76□□□□□ -0.53
CDKL3-203ENST00000519312 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
CDKL3-203ENST00000519312 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
CDKL3-203ENST00000519312 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
CDKL3-203ENST00000519312 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
CDKL3-203ENST00000519312 COL22A1Q8NFW1 1626 aaPredicted RBP11.74□□□□□ -0.53
CDKL3-203ENST00000519312 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
CDKL3-203ENST00000519312 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
CDKL3-203ENST00000519312 DPYSL4O14531 572 aa11.73□□□□□ -0.53
CDKL3-203ENST00000519312 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
CDKL3-203ENST00000519312 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
CDKL3-203ENST00000519312 SRCAPQ6ZRS2 3230 aa11.73□□□□□ -0.53
CDKL3-203ENST00000519312 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
CDKL3-203ENST00000519312 ATAD2Q6PL18 1390 aa11.7□□□□□ -0.54
CDKL3-203ENST00000519312 NGLY1Q96IV0 654 aa11.7□□□□□ -0.54
CDKL3-203ENST00000519312 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
CDKL3-203ENST00000519312 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
CDKL3-203ENST00000519312 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
CDKL3-203ENST00000519312 MYOM2P54296 1465 aa11.7□□□□□ -0.54
CDKL3-203ENST00000519312 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
CDKL3-203ENST00000519312 ATRNO75882 1429 aa11.69□□□□□ -0.54
CDKL3-203ENST00000519312 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
CDKL3-203ENST00000519312 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
CDKL3-203ENST00000519312 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
CDKL3-203ENST00000519312 KIF1BO60333 1816 aa11.69□□□□□ -0.54
CDKL3-203ENST00000519312 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
CDKL3-203ENST00000519312 TK2O00142 265 aa11.68□□□□□ -0.54
CDKL3-203ENST00000519312 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
CDKL3-203ENST00000519312 EP400Q96L91 3159 aa11.68□□□□□ -0.54
CDKL3-203ENST00000519312 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
CDKL3-203ENST00000519312 PCDHGA10Q9Y5H3 936 aa11.67□□□□□ -0.54
CDKL3-203ENST00000519312 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
CDKL3-203ENST00000519312 PXDNQ92626 1479 aa11.66□□□□□ -0.54
CDKL3-203ENST00000519312 PTPREP23469 700 aa11.66□□□□□ -0.54
CDKL3-203ENST00000519312 TRPC5Q9UL62 973 aaPredicted RBP11.66□□□□□ -0.54
CDKL3-203ENST00000519312 NAIPQ13075 1403 aa11.66□□□□□ -0.54
CDKL3-203ENST00000519312 HRO43593 1189 aa11.65□□□□□ -0.54
CDKL3-203ENST00000519312 TECPR2O15040 1411 aa11.65□□□□□ -0.54
CDKL3-203ENST00000519312 RRBP1Q9P2E9 1410 aaKnown RBP11.65□□□□□ -0.54
CDKL3-203ENST00000519312 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.65□□□□□ -0.54
CDKL3-203ENST00000519312 PPLO60437 1756 aa11.64□□□□□ -0.55
CDKL3-203ENST00000519312 MARF1Q9Y4F3 1742 aaKnown RBP11.64□□□□□ -0.55
CDKL3-203ENST00000519312 ORAI2Q96SN7 254 aa11.64□□□□□ -0.55
CDKL3-203ENST00000519312 USP21Q9UK80 565 aa11.64□□□□□ -0.55
CDKL3-203ENST00000519312 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 E2F4Q16254 413 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 WDR70Q9NW82 654 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
CDKL3-203ENST00000519312 PHF14O94880 888 aa11.62□□□□□ -0.55
CDKL3-203ENST00000519312 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
CDKL3-203ENST00000519312 KNDC1Q76NI1 1749 aa11.61□□□□□ -0.55
CDKL3-203ENST00000519312 TYW1BQ6NUM6 668 aa11.61□□□□□ -0.55
CDKL3-203ENST00000519312 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
CDKL3-203ENST00000519312 DDX12PQ92771 950 aa11.6□□□□□ -0.55
CDKL3-203ENST00000519312 SLIT2O94813 1529 aa11.6□□□□□ -0.55
CDKL3-203ENST00000519312 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
CDKL3-203ENST00000519312 ITGAEP38570 1179 aa11.59□□□□□ -0.55
CDKL3-203ENST00000519312 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
CDKL3-203ENST00000519312 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
CDKL3-203ENST00000519312 PDIA6Q15084 440 aa11.58□□□□□ -0.56
CDKL3-203ENST00000519312 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
CDKL3-203ENST00000519312 GLI3P10071 1580 aa11.58□□□□□ -0.56
CDKL3-203ENST00000519312 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
CDKL3-203ENST00000519312 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 CCDC144AA2RUR9 1427 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 FMN2Q9NZ56 1722 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
CDKL3-203ENST00000519312 COL9A1P20849 921 aa11.56□□□□□ -0.56
CDKL3-203ENST00000519312 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
CDKL3-203ENST00000519312 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
CDKL3-203ENST00000519312 ANKRD30BQ9BXX2 1392 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 ESCO1Q5FWF5 840 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 EPAS1Q99814 870 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 SPATA31A3Q5VYP0 1347 aa11.55□□□□□ -0.56
CDKL3-203ENST00000519312 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
CDKL3-203ENST00000519312 NWD2Q9ULI1 1742 aa11.54□□□□□ -0.56
CDKL3-203ENST00000519312 LRP5O75197 1615 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms