RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 PARD3Q8TEW0 1356 aa4.9□□□□□ -1.62
SREK1-206ENST00000519259 PPP2R1AP30153 589 aa4.9□□□□□ -1.62
SREK1-206ENST00000519259 XPCQ01831 940 aaPredicted RBP4.9□□□□□ -1.62
SREK1-206ENST00000519259 RBM33Q96EV2 1170 aaKnown RBP4.9□□□□□ -1.62
SREK1-206ENST00000519259 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.62
SREK1-206ENST00000519259 CPDO75976 1380 aa4.9□□□□□ -1.62
SREK1-206ENST00000519259 MSH5O43196 834 aa4.9□□□□□ -1.63
SREK1-206ENST00000519259 SEPT12Q8IYM1 358 aa4.9□□□□□ -1.63
SREK1-206ENST00000519259 HOXB7P09629 217 aa4.9□□□□□ -1.63
SREK1-206ENST00000519259 DDX54Q8TDD1 881 aaKnown RBP4.9□□□□□ -1.63
SREK1-206ENST00000519259 PRKRIP1Q9H875 184 aaPredicted RBP4.9□□□□□ -1.63
SREK1-206ENST00000519259 MAP3K19Q56UN5 1328 aa4.9□□□□□ -1.63
SREK1-206ENST00000519259 SULT6B1Q6IMI4 303 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 LRRC7Q96NW7 1537 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 AAMPQ13685 434 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 CHRNA2Q15822 529 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 NFE2L2Q16236 605 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 USP6P35125 1406 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 TNNT2P45379 298 aaPredicted RBP4.89□□□□□ -1.63
SREK1-206ENST00000519259 SLC27A3Q5K4L6 730 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 PLEKHH1Q9ULM0 1364 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 NUTM2GQ5VZR2 741 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 NLGN1Q8N2Q7 840 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 RBM42Q9BTD8 480 aaKnown RBP4.89□□□□□ -1.63
SREK1-206ENST00000519259 CC2D2BQ6DHV5 1058 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 OVOS2A0A0G2JMS6 1433 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 OVOS2A0A0J9YW53 1432 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 OVOS2Q6IE36 1432 aa4.89□□□□□ -1.63
SREK1-206ENST00000519259 APBA3O96018 575 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 E9PSI1 815 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 ADRA2BP18089 450 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 WDR63Q8IWG1 891 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 POLKQ9UBT6 870 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 GRIPAP1Q4V328 841 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 VSIG10Q8N0Z9 540 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 ABCA6Q8N139 1617 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 CCDC30Q5VVM6 783 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 IL16Q14005 1332 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 MYO5CQ9NQX4 1742 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 SOGA3Q5TF21 947 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 ARXQ96QS3 562 aa4.88□□□□□ -1.63
SREK1-206ENST00000519259 TAF7Q15545 349 aaPredicted RBP4.87□□□□□ -1.63
SREK1-206ENST00000519259 UNC13BO14795 1591 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 CCDC87Q9NVE4 849 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 PRKAR2BP31323 418 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 PARP10Q53GL7 1025 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 KIF6Q6ZMV9 814 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 SYTL4Q96C24 671 aaPredicted RBP4.87□□□□□ -1.63
SREK1-206ENST00000519259 ERBB3P21860 1342 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 CDC42BPGQ6DT37 1551 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 PLSCR1O15162 318 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 HSP90AB4PQ58FF6 505 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 TSPYL4Q9UJ04 414 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
SREK1-206ENST00000519259 TULP4Q9NRJ4 1543 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 SPATA31A5Q5VU36 1347 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 SPATA31A7Q8IWB4 1347 aa4.87□□□□□ -1.63
SREK1-206ENST00000519259 IGSF3O75054 1194 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 RIPK4P57078 832 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 FAM9BQ8IZU0 186 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 EYA1Q99502 592 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 RNF17Q9BXT8 1623 aaKnown RBP4.86□□□□□ -1.63
SREK1-206ENST00000519259 ZC3H13Q5T200 1668 aaKnown RBP4.86□□□□□ -1.63
SREK1-206ENST00000519259 USP35Q9P2H5 1018 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 FAM98CQ17RN3 349 aaKnown RBP4.86□□□□□ -1.63
SREK1-206ENST00000519259 SUPT20HQ8NEM7 779 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 SMC4Q9NTJ3 1288 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 RTCBQ9Y3I0 505 aaKnown RBP4.86□□□□□ -1.63
SREK1-206ENST00000519259 SPATA31A1Q5TZJ5 1347 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 TMC4Q7Z404 712 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 CABLES1Q8TDN4 633 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 NYXQ9GZU5 481 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 EMILIN1Q9Y6C2 1016 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 SPON1Q9HCB6 807 aa4.86□□□□□ -1.63
SREK1-206ENST00000519259 TET3O43151 1660 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 KIAA0232Q92628 1395 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 RC3H1Q5TC82 1133 aaKnown RBP4.85□□□□□ -1.63
SREK1-206ENST00000519259 ADGBQ8N7X0 1667 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 A0A1W2PP64 1363 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 DEPDC5O75140 1603 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 G3V3G9 751 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 HMMRO75330 724 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 DCAF8Q5TAQ9 597 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 PPP1R42Q7Z4L9 355 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 EIF4A2Q14240 407 aaKnown RBP4.85□□□□□ -1.63
SREK1-206ENST00000519259 MADDQ8WXG6 1647 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 IGSF1Q8N6C5 1336 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 ZPR1O75312 459 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 NKX1-1Q15270 411 aaPredicted RBP4.85□□□□□ -1.63
SREK1-206ENST00000519259 CCDC27Q2M243 656 aa4.85□□□□□ -1.63
SREK1-206ENST00000519259 AMER1Q5JTC6 1135 aaPredicted RBP4.85□□□□□ -1.63
SREK1-206ENST00000519259 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
SREK1-206ENST00000519259 PDE6BP35913 854 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 CRB1P82279 1406 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 SETBP1Q9Y6X0 1596 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 PARP3Q9Y6F1 533 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 GRIN3BO60391 1043 aa4.84□□□□□ -1.63
SREK1-206ENST00000519259 ONECUT3O60422 494 aaPredicted RBP4.84□□□□□ -1.63
SREK1-206ENST00000519259 PHKG2P15735 406 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms