RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 DSG2Q14126 1118 aa13.96□□□□□ -0.17
MSR1-210ENST00000519060 MYOM2P54296 1465 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 PPP1R15BQ5SWA1 713 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 LRPPRCP42704 1394 aaKnown RBP13.94□□□□□ -0.18
MSR1-210ENST00000519060 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
MSR1-210ENST00000519060 PXDNQ92626 1479 aa13.93□□□□□ -0.18
MSR1-210ENST00000519060 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
MSR1-210ENST00000519060 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
MSR1-210ENST00000519060 PLPP6Q8IY26 295 aa13.93□□□□□ -0.18
MSR1-210ENST00000519060 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
MSR1-210ENST00000519060 SPATA31A3Q5VYP0 1347 aa13.92□□□□□ -0.18
MSR1-210ENST00000519060 SIRT1Q96EB6 747 aa13.91□□□□□ -0.18
MSR1-210ENST00000519060 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
MSR1-210ENST00000519060 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
MSR1-210ENST00000519060 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
MSR1-210ENST00000519060 PPLO60437 1756 aa13.9□□□□□ -0.18
MSR1-210ENST00000519060 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
MSR1-210ENST00000519060 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.19
MSR1-210ENST00000519060 TECPR2O15040 1411 aa13.9□□□□□ -0.19
MSR1-210ENST00000519060 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
MSR1-210ENST00000519060 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
MSR1-210ENST00000519060 PSME1Q06323 249 aa13.87□□□□□ -0.19
MSR1-210ENST00000519060 CFAP70Q5T0N1 1121 aa13.87□□□□□ -0.19
MSR1-210ENST00000519060 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
MSR1-210ENST00000519060 SEPT12Q8IYM1 358 aa13.86□□□□□ -0.19
MSR1-210ENST00000519060 YTHDC2Q9H6S0 1430 aaKnown RBP13.86□□□□□ -0.19
MSR1-210ENST00000519060 SLIT2O94813 1529 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 SNPHO15079 494 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSR1-210ENST00000519060 VPS72Q15906 364 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
MSR1-210ENST00000519060 PIK3C2GO75747 1445 aa13.84□□□□□ -0.19
MSR1-210ENST00000519060 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
MSR1-210ENST00000519060 E2F4Q16254 413 aa13.84□□□□□ -0.19
MSR1-210ENST00000519060 PRAM1Q96QH2 718 aa13.84□□□□□ -0.19
MSR1-210ENST00000519060 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
MSR1-210ENST00000519060 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
MSR1-210ENST00000519060 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
MSR1-210ENST00000519060 EP400Q96L91 3159 aa13.83□□□□□ -0.2
MSR1-210ENST00000519060 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
MSR1-210ENST00000519060 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
MSR1-210ENST00000519060 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
MSR1-210ENST00000519060 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
MSR1-210ENST00000519060 POGKQ9P215 609 aa13.81□□□□□ -0.2
MSR1-210ENST00000519060 GLI3P10071 1580 aa13.8□□□□□ -0.2
MSR1-210ENST00000519060 SLC34A2O95436 690 aa13.8□□□□□ -0.2
MSR1-210ENST00000519060 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
MSR1-210ENST00000519060 KRT27Q7Z3Y8 459 aa13.8□□□□□ -0.2
MSR1-210ENST00000519060 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
MSR1-210ENST00000519060 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
MSR1-210ENST00000519060 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
MSR1-210ENST00000519060 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
MSR1-210ENST00000519060 ARHGEF10O15013 1369 aa13.77□□□□□ -0.21
MSR1-210ENST00000519060 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
MSR1-210ENST00000519060 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
MSR1-210ENST00000519060 NRXN1Q9ULB1 1477 aa13.76□□□□□ -0.21
MSR1-210ENST00000519060 ACIN1Q9UKV3 1341 aaKnown RBP13.76□□□□□ -0.21
MSR1-210ENST00000519060 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
MSR1-210ENST00000519060 PTCD2Q8WV60 388 aaKnown RBP13.76□□□□□ -0.21
MSR1-210ENST00000519060 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
MSR1-210ENST00000519060 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
MSR1-210ENST00000519060 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
MSR1-210ENST00000519060 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
MSR1-210ENST00000519060 RIMBP2O15034 1052 aa13.75□□□□□ -0.21
MSR1-210ENST00000519060 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
MSR1-210ENST00000519060 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
MSR1-210ENST00000519060 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
MSR1-210ENST00000519060 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
MSR1-210ENST00000519060 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
MSR1-210ENST00000519060 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
MSR1-210ENST00000519060 A0A0G2JS52 829 aa13.74□□□□□ -0.21
MSR1-210ENST00000519060 MYT1Q01538 1121 aa13.74□□□□□ -0.21
MSR1-210ENST00000519060 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
MSR1-210ENST00000519060 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
MSR1-210ENST00000519060 WASLO00401 505 aaPredicted RBP13.73□□□□□ -0.21
MSR1-210ENST00000519060 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
MSR1-210ENST00000519060 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
MSR1-210ENST00000519060 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
MSR1-210ENST00000519060 ZSWIM6Q9HCJ5 1215 aa13.73□□□□□ -0.21
MSR1-210ENST00000519060 PSDA5PKW4 1024 aaPredicted RBP13.72□□□□□ -0.21
MSR1-210ENST00000519060 BAG6P46379 1132 aa13.72□□□□□ -0.21
MSR1-210ENST00000519060 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
MSR1-210ENST00000519060 DCAF11Q8TEB1 546 aa13.72□□□□□ -0.21
MSR1-210ENST00000519060 ANKARQ7Z5J8 1434 aa13.72□□□□□ -0.21
MSR1-210ENST00000519060 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
MSR1-210ENST00000519060 TBC1D12O60347 775 aa13.71□□□□□ -0.21
MSR1-210ENST00000519060 EN1Q05925 392 aaPredicted RBP13.71□□□□□ -0.21
MSR1-210ENST00000519060 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
MSR1-210ENST00000519060 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
MSR1-210ENST00000519060 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
MSR1-210ENST00000519060 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
MSR1-210ENST00000519060 HRCP23327 699 aa13.7□□□□□ -0.22
MSR1-210ENST00000519060 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
MSR1-210ENST00000519060 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
MSR1-210ENST00000519060 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms