RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 WDR63Q8IWG1 891 aa19.76■□□□□ 0.75
TRAPPC9-205ENST00000518839 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
TRAPPC9-205ENST00000518839 SLAIN2Q9P270 581 aa19.76■□□□□ 0.75
TRAPPC9-205ENST00000518839 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
TRAPPC9-205ENST00000518839 PRKAR2BP31323 418 aa19.75■□□□□ 0.75
TRAPPC9-205ENST00000518839 XPCQ01831 940 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC9-205ENST00000518839 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
TRAPPC9-205ENST00000518839 HSP90AB2PQ58FF8 381 aa19.75■□□□□ 0.75
TRAPPC9-205ENST00000518839 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
TRAPPC9-205ENST00000518839 HOXC9P31274 260 aa19.74■□□□□ 0.75
TRAPPC9-205ENST00000518839 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
TRAPPC9-205ENST00000518839 BRINP3Q76B58 766 aa19.74■□□□□ 0.75
TRAPPC9-205ENST00000518839 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
TRAPPC9-205ENST00000518839 MED1Q15648 1581 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC9-205ENST00000518839 NHSL1Q5SYE7 1610 aa19.73■□□□□ 0.75
TRAPPC9-205ENST00000518839 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
TRAPPC9-205ENST00000518839 HMOX1P09601 288 aa19.72■□□□□ 0.75
TRAPPC9-205ENST00000518839 TRMT2AQ8IZ69 625 aaKnown RBP19.72■□□□□ 0.75
TRAPPC9-205ENST00000518839 IP6K1Q92551 441 aa19.72■□□□□ 0.75
TRAPPC9-205ENST00000518839 GCP02774 474 aa19.71■□□□□ 0.75
TRAPPC9-205ENST00000518839 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
TRAPPC9-205ENST00000518839 DUSP27Q5VZP5 1158 aa19.71■□□□□ 0.75
TRAPPC9-205ENST00000518839 RRP7AQ9Y3A4 280 aaKnown RBP19.71■□□□□ 0.75
TRAPPC9-205ENST00000518839 SPATA31A3Q5VYP0 1347 aa19.71■□□□□ 0.75
TRAPPC9-205ENST00000518839 CRYBG1Q9Y4K1 1723 aa19.7■□□□□ 0.74
TRAPPC9-205ENST00000518839 DLG5Q8TDM6 1919 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 ABCC6O95255 1503 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 IL16Q14005 1332 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 RNF123Q5XPI4 1314 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 KDRP35968 1356 aa19.69■□□□□ 0.74
TRAPPC9-205ENST00000518839 RIPK4P57078 832 aa19.68■□□□□ 0.74
TRAPPC9-205ENST00000518839 FKBP8Q14318 412 aa19.68■□□□□ 0.74
TRAPPC9-205ENST00000518839 SULT6B1Q6IMI4 303 aa19.68■□□□□ 0.74
TRAPPC9-205ENST00000518839 ARHGEF25Q86VW2 580 aa19.68■□□□□ 0.74
TRAPPC9-205ENST00000518839 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC9-205ENST00000518839 CALD1Q05682 793 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-205ENST00000518839 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
TRAPPC9-205ENST00000518839 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
TRAPPC9-205ENST00000518839 EYA1Q99502 592 aa19.64■□□□□ 0.73
TRAPPC9-205ENST00000518839 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
TRAPPC9-205ENST00000518839 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
TRAPPC9-205ENST00000518839 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
TRAPPC9-205ENST00000518839 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
TRAPPC9-205ENST00000518839 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC9-205ENST00000518839 ROBO1Q9Y6N7 1651 aa19.61■□□□□ 0.73
TRAPPC9-205ENST00000518839 CAMTA1Q9Y6Y1 1673 aa19.61■□□□□ 0.73
TRAPPC9-205ENST00000518839 AHDC1Q5TGY3 1603 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-205ENST00000518839 COL18A1P39060 1754 aa19.6■□□□□ 0.73
TRAPPC9-205ENST00000518839 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
TRAPPC9-205ENST00000518839 CPDO75976 1380 aa19.6■□□□□ 0.73
TRAPPC9-205ENST00000518839 ABCA3Q99758 1704 aa19.6■□□□□ 0.73
TRAPPC9-205ENST00000518839 ZBTB7CA1YPR0 619 aa19.6■□□□□ 0.73
TRAPPC9-205ENST00000518839 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-205ENST00000518839 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC9-205ENST00000518839 RGPD2P0DJD1 1756 aa19.59■□□□□ 0.73
TRAPPC9-205ENST00000518839 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC9-205ENST00000518839 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
TRAPPC9-205ENST00000518839 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
TRAPPC9-205ENST00000518839 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-205ENST00000518839 ZC3H6P61129 1189 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-205ENST00000518839 ANKRD24Q8TF21 1146 aa19.55■□□□□ 0.72
TRAPPC9-205ENST00000518839 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
TRAPPC9-205ENST00000518839 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
TRAPPC9-205ENST00000518839 GNAI1P63096 354 aa19.54■□□□□ 0.72
TRAPPC9-205ENST00000518839 IFT57Q9NWB7 429 aa19.54■□□□□ 0.72
TRAPPC9-205ENST00000518839 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
TRAPPC9-205ENST00000518839 FANCIQ9NVI1 1328 aa19.53■□□□□ 0.72
TRAPPC9-205ENST00000518839 ERBB3P21860 1342 aa19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 NBPF6Q5VWK0 638 aa19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 CABLES1Q8TDN4 633 aa19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 LRRC59Q96AG4 307 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 NBPF4Q96M43 638 aa19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
TRAPPC9-205ENST00000518839 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 TOM1O60784 492 aa19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 MTHFSDQ2M296 383 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
TRAPPC9-205ENST00000518839 AXIN2Q9Y2T1 843 aa19.5■□□□□ 0.71
TRAPPC9-205ENST00000518839 PHLPP1O60346 1717 aa19.49■□□□□ 0.71
TRAPPC9-205ENST00000518839 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
TRAPPC9-205ENST00000518839 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
TRAPPC9-205ENST00000518839 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
TRAPPC9-205ENST00000518839 AMOTQ4VCS5 1084 aa19.48■□□□□ 0.71
TRAPPC9-205ENST00000518839 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
TRAPPC9-205ENST00000518839 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 PLEKHO1Q53GL0 409 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 ZNF428Q96B54 188 aa19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 PRDM11Q9NQV5 511 aa19.47■□□□□ 0.71
TRAPPC9-205ENST00000518839 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms