RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 KDM4AO75164 1064 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 FDX1P10109 184 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 FOSBP53539 338 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 RDH13Q8NBN7 331 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 EYA1Q99502 592 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 MAGI3Q5TCQ9 1506 aa8.12□□□□□ -1.11
EFCAB13-206ENST00000518646 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
EFCAB13-206ENST00000518646 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
EFCAB13-206ENST00000518646 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
EFCAB13-206ENST00000518646 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
EFCAB13-206ENST00000518646 HOXA2O43364 376 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 HRO43593 1189 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 DNAJB2P25686 324 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 MYT1Q01538 1121 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 PCDHGA4Q9Y5G9 962 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 FHAD1B1AJZ9 1412 aa8.1□□□□□ -1.11
EFCAB13-206ENST00000518646 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 ARAP3Q8WWN8 1544 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 SOWAHDA6NJG2 315 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 USP46P62068 366 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 PNMA1Q8ND90 353 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
EFCAB13-206ENST00000518646 TOM1O60784 492 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 SSFA2P28290 1259 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 MTMR2Q13614 643 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 SREK1Q8WXA9 508 aaKnown RBP8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 PCDHGC3Q9UN70 934 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 CD109Q6YHK3 1445 aa8.08□□□□□ -1.12
EFCAB13-206ENST00000518646 CCDC88BA6NC98 1476 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 ZNF335Q9H4Z2 1342 aaPredicted RBP8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 TTC37Q6PGP7 1564 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 PTPRGP23470 1445 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 EIF5BO60841 1220 aaKnown RBP8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 GUCA2AQ02747 115 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 TMEM134Q9H6X4 195 aa8.07□□□□□ -1.12
EFCAB13-206ENST00000518646 PTPN5P54829 565 aa8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 CHMP4AQ9BY43 222 aa8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 ABCA10Q8WWZ4 1543 aa8.06□□□□□ -1.12
EFCAB13-206ENST00000518646 UHRF1BP1Q6BDS2 1440 aa8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 PPM1GO15355 546 aaPredicted RBP8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 CANXP27824 592 aaKnown RBP8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 SERPINB4P48594 390 aa8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 NR6A1Q15406 480 aa8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 FER1L4A9Z1Z3 1794 aa8.05□□□□□ -1.12
EFCAB13-206ENST00000518646 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 CUX1P39880 1505 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 ANKRD33BA6NCL7 494 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 CFAP99D6REC4 459 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 ZNF326Q5BKZ1 582 aaKnown RBP8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 NPAS4Q8IUM7 802 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 SLF2Q8IX21 1173 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 HLA-CQ95604 372 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 UHRF1BP1LA0JNW5 1464 aa8.04□□□□□ -1.12
EFCAB13-206ENST00000518646 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L12C9JPN9 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L21D6R901 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 GCGRP47871 477 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 ZC3H6P61129 1189 aaKnown RBP8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 PNMA3Q9UL41 463 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 POGZQ7Z3K3 1410 aa8.03□□□□□ -1.12
EFCAB13-206ENST00000518646 SETD1BQ9UPS6 1966 aaKnown RBP8.02□□□□□ -1.12
EFCAB13-206ENST00000518646 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 C3orf80F5H4A9 247 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 SMARCA5O60264 1052 aaPredicted RBP8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 RAPGEF3O95398 923 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 SKIP12755 728 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 TSKSQ9UJT2 592 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
EFCAB13-206ENST00000518646 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
EFCAB13-206ENST00000518646 C6orf229H3BNL8 230 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms