RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 ABCA9Q8IUA7 1624 aa6.21□□□□□ -1.42
CPNE3-204ENST00000517862 NINLQ9Y2I6 1382 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 RTEL1-TNFRSF6BF6WH68 1400 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 S1PR4O95977 384 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 VEGFBP49765 207 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 MAP3K9P80192 1104 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 PPP1R15BQ5SWA1 713 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
CPNE3-204ENST00000517862 HECW1Q76N89 1606 aa6.19□□□□□ -1.42
CPNE3-204ENST00000517862 Q8N3U1 123 aa6.19□□□□□ -1.42
CPNE3-204ENST00000517862 MPNDQ8N594 471 aa6.19□□□□□ -1.42
CPNE3-204ENST00000517862 XIRP1Q702N8 1843 aaKnown RBP6.19□□□□□ -1.42
CPNE3-204ENST00000517862 TTC24A2A3L6 582 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-204ENST00000517862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPNE3-204ENST00000517862 COL16A1Q07092 1604 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-204ENST00000517862 FGD6Q6ZV73 1430 aa6.17□□□□□ -1.42
CPNE3-204ENST00000517862 SCAF11Q99590 1463 aaKnown RBP6.17□□□□□ -1.42
CPNE3-204ENST00000517862 C8orf37Q96NL8 207 aa6.17□□□□□ -1.42
CPNE3-204ENST00000517862 TSKSQ9UJT2 592 aa6.17□□□□□ -1.42
CPNE3-204ENST00000517862 AATKQ6ZMQ8 1374 aa6.17□□□□□ -1.42
CPNE3-204ENST00000517862 SHPRHQ149N8 1683 aa6.17□□□□□ -1.42
CPNE3-204ENST00000517862 SMAPO00193 183 aa6.16□□□□□ -1.42
CPNE3-204ENST00000517862 DNAJC5GQ8N7S2 189 aa6.16□□□□□ -1.42
CPNE3-204ENST00000517862 PRR14Q9BWN1 585 aa6.16□□□□□ -1.42
CPNE3-204ENST00000517862 PCDHB3Q9Y5E6 796 aa6.16□□□□□ -1.42
CPNE3-204ENST00000517862 TLL1O43897 1013 aa6.15□□□□□ -1.42
CPNE3-204ENST00000517862 EPAS1Q99814 870 aa6.15□□□□□ -1.42
CPNE3-204ENST00000517862 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
CPNE3-204ENST00000517862 ANKLE2Q86XL3 938 aa6.14□□□□□ -1.43
CPNE3-204ENST00000517862 NPHP4O75161 1426 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-204ENST00000517862 DNMT1P26358 1616 aaKnown RBP6.14□□□□□ -1.43
CPNE3-204ENST00000517862 ADGBQ8N7X0 1667 aa6.14□□□□□ -1.43
CPNE3-204ENST00000517862 MLLT1Q03111 559 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-204ENST00000517862 PLA2G2CQ5R387 149 aa6.13□□□□□ -1.43
CPNE3-204ENST00000517862 LRRC9Q6ZRR7 1453 aa6.13□□□□□ -1.43
CPNE3-204ENST00000517862 BAG6P46379 1132 aa6.12□□□□□ -1.43
CPNE3-204ENST00000517862 NBR1Q14596 966 aa6.12□□□□□ -1.43
CPNE3-204ENST00000517862 MROH2AA6NES4 1674 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 IQGAP1P46940 1657 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 WRNQ14191 1432 aaPredicted RBP eCLIP6.11□□□□□ -1.43
CPNE3-204ENST00000517862 ZMYM3Q14202 1370 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 FAM83GA6ND36 823 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 NBPF26B4DH59 902 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 SLC4A3P48751 1232 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 BLOC1S3Q6QNY0 202 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 SPON1Q9HCB6 807 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 KIAA1210Q9ULL0 1709 aa6.11□□□□□ -1.43
CPNE3-204ENST00000517862 CFAP74Q9C0B2 1584 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 DISP1Q96F81 1524 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 A2ML1A8K2U0 1454 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 CD2BP2O95400 341 aaKnown RBP6.1□□□□□ -1.43
CPNE3-204ENST00000517862 SLF2Q8IX21 1173 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 HS6ST3Q8IZP7 471 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 TRPC5Q9UL62 973 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-204ENST00000517862 SHANK3Q9BYB0 1731 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 PCNTO95613 3336 aa6.1□□□□□ -1.43
CPNE3-204ENST00000517862 AGLP35573 1532 aa6.09□□□□□ -1.43
CPNE3-204ENST00000517862 DLL1O00548 723 aa6.09□□□□□ -1.43
CPNE3-204ENST00000517862 IRS1P35568 1242 aa6.09□□□□□ -1.43
CPNE3-204ENST00000517862 RPIAP49247 311 aa6.09□□□□□ -1.43
CPNE3-204ENST00000517862 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
CPNE3-204ENST00000517862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.44
CPNE3-204ENST00000517862 KDM5DQ9BY66 1539 aa6.09□□□□□ -1.44
CPNE3-204ENST00000517862 MED14O60244 1454 aa6.09□□□□□ -1.44
CPNE3-204ENST00000517862 PDE4DIPQ5VU43 2346 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 PITPNM2Q9BZ72 1349 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 ARID3CA6NKF2 412 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 MSTNO14793 375 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 SMPD1P17405 629 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 KANK3Q6NY19 840 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 JMYQ8N9B5 988 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 SLAIN2Q9P270 581 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 PNMA3Q9UL41 463 aa6.08□□□□□ -1.44
CPNE3-204ENST00000517862 UNC13BO14795 1591 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 NKX1-1Q15270 411 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-204ENST00000517862 TATDN2Q93075 761 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 SLC6A16Q9GZN6 736 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 CRISPLD2Q9H0B8 497 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 USP21Q9UK80 565 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 ATP10BO94823 1461 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 DEPDC5O75140 1603 aa6.07□□□□□ -1.44
CPNE3-204ENST00000517862 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
CPNE3-204ENST00000517862 KCNQ2O43526 872 aa6.06□□□□□ -1.44
CPNE3-204ENST00000517862 ADH1BP00325 375 aa6.06□□□□□ -1.44
CPNE3-204ENST00000517862 EN1Q05925 392 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-204ENST00000517862 RALGAPBQ86X10 1494 aa6.06□□□□□ -1.44
CPNE3-204ENST00000517862 VSIG8P0DPA2 414 aa6.05□□□□□ -1.44
CPNE3-204ENST00000517862 SNIP1Q8TAD8 396 aaKnown RBP6.05□□□□□ -1.44
CPNE3-204ENST00000517862 KLRG1Q96E93 195 aa6.05□□□□□ -1.44
CPNE3-204ENST00000517862 TMEM94Q12767 1356 aa6.05□□□□□ -1.44
CPNE3-204ENST00000517862 ABCC1P33527 1531 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 USP19O94966 1318 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 SCAPERQ9BY12 1400 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 ITSN2Q9NZM3 1697 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 BRWD3Q6RI45 1802 aa6.04□□□□□ -1.44
CPNE3-204ENST00000517862 KIF14Q15058 1648 aa6.03□□□□□ -1.44
CPNE3-204ENST00000517862 K7ELQ4 463 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-204ENST00000517862 ADAMTS2O95450 1211 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms