RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
NPM1-204ENST00000517671 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
NPM1-204ENST00000517671 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
NPM1-204ENST00000517671 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
NPM1-204ENST00000517671 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
NPM1-204ENST00000517671 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
NPM1-204ENST00000517671 PCDHB3Q9Y5E6 796 aa12.5□□□□□ -0.41
NPM1-204ENST00000517671 MS4A1P11836 297 aa12.49□□□□□ -0.41
NPM1-204ENST00000517671 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
NPM1-204ENST00000517671 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
NPM1-204ENST00000517671 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
NPM1-204ENST00000517671 KDM4AO75164 1064 aa12.48□□□□□ -0.41
NPM1-204ENST00000517671 ATP7AQ04656 1500 aa12.48□□□□□ -0.41
NPM1-204ENST00000517671 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
NPM1-204ENST00000517671 CPS1P31327 1500 aa12.47□□□□□ -0.41
NPM1-204ENST00000517671 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.41
NPM1-204ENST00000517671 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
NPM1-204ENST00000517671 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.41
NPM1-204ENST00000517671 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.42
NPM1-204ENST00000517671 SYCP2Q9BX26 1530 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 USP46P62068 366 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 KCNC4Q03721 635 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 FUT2Q10981 343 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 TNRQ92752 1358 aa12.45□□□□□ -0.42
NPM1-204ENST00000517671 KIF3BO15066 747 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 HSPA1LP34931 641 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
NPM1-204ENST00000517671 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 PLXNC1O60486 1568 aa12.44□□□□□ -0.42
NPM1-204ENST00000517671 COPS2P61201 443 aa12.43□□□□□ -0.42
NPM1-204ENST00000517671 Q6ZNB5 142 aa12.43□□□□□ -0.42
NPM1-204ENST00000517671 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
NPM1-204ENST00000517671 NR1I2O75469 434 aa12.42□□□□□ -0.42
NPM1-204ENST00000517671 MTRQ99707 1265 aa12.42□□□□□ -0.42
NPM1-204ENST00000517671 IL21Q9HBE4 155 aa12.42□□□□□ -0.42
NPM1-204ENST00000517671 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
NPM1-204ENST00000517671 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
NPM1-204ENST00000517671 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
NPM1-204ENST00000517671 NLRP1Q9C000 1473 aa12.41□□□□□ -0.42
NPM1-204ENST00000517671 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
NPM1-204ENST00000517671 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
NPM1-204ENST00000517671 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
NPM1-204ENST00000517671 MBD5Q9P267 1494 aa12.4□□□□□ -0.42
NPM1-204ENST00000517671 INO80Q9ULG1 1556 aaPredicted RBP12.4□□□□□ -0.42
NPM1-204ENST00000517671 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
NPM1-204ENST00000517671 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
NPM1-204ENST00000517671 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
NPM1-204ENST00000517671 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
NPM1-204ENST00000517671 PZPP20742 1482 aa12.39□□□□□ -0.43
NPM1-204ENST00000517671 SUPT6HQ7KZ85 1726 aaKnown RBP12.39□□□□□ -0.43
NPM1-204ENST00000517671 CLTCQ00610 1675 aaKnown RBP12.39□□□□□ -0.43
NPM1-204ENST00000517671 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
NPM1-204ENST00000517671 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
NPM1-204ENST00000517671 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
NPM1-204ENST00000517671 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
NPM1-204ENST00000517671 MED14O60244 1454 aa12.38□□□□□ -0.43
NPM1-204ENST00000517671 LRRIQ1Q96JM4 1722 aa12.38□□□□□ -0.43
NPM1-204ENST00000517671 MORN1Q5T089 497 aa12.37□□□□□ -0.43
NPM1-204ENST00000517671 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
NPM1-204ENST00000517671 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
NPM1-204ENST00000517671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.37□□□□□ -0.436e-10■■■□□ 18.9
NPM1-204ENST00000517671 HOXA2O43364 376 aa12.37□□□□□ -0.43
NPM1-204ENST00000517671 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
NPM1-204ENST00000517671 NPHP4O75161 1426 aaPredicted RBP12.36□□□□□ -0.43
NPM1-204ENST00000517671 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
NPM1-204ENST00000517671 ZPR1O75312 459 aa12.36□□□□□ -0.43
NPM1-204ENST00000517671 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
NPM1-204ENST00000517671 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
NPM1-204ENST00000517671 Q3C1V9 767 aa12.35□□□□□ -0.43
NPM1-204ENST00000517671 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
NPM1-204ENST00000517671 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
NPM1-204ENST00000517671 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
NPM1-204ENST00000517671 UGGT1Q9NYU2 1555 aa12.33□□□□□ -0.44
NPM1-204ENST00000517671 FDX1P10109 184 aa12.33□□□□□ -0.44
NPM1-204ENST00000517671 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
NPM1-204ENST00000517671 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
NPM1-204ENST00000517671 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
NPM1-204ENST00000517671 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
NPM1-204ENST00000517671 DEPDC5O75140 1603 aa12.31□□□□□ -0.44
NPM1-204ENST00000517671 NDUFV2P19404 249 aa12.31□□□□□ -0.44
NPM1-204ENST00000517671 LAPTM4AQ15012 233 aa12.31□□□□□ -0.44
NPM1-204ENST00000517671 RIC3Q7Z5B4 369 aa12.31□□□□□ -0.44
NPM1-204ENST00000517671 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
NPM1-204ENST00000517671 HLA-CQ95604 372 aa12.3□□□□□ -0.44
NPM1-204ENST00000517671 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
NPM1-204ENST00000517671 GJA5P36382 358 aa12.29□□□□□ -0.44
NPM1-204ENST00000517671 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
NPM1-204ENST00000517671 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 SPSB2Q99619 263 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 POLR3EQ9NVU0 708 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 VWDEQ8N2E2 1590 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 NEURL4Q96JN8 1562 aa12.28□□□□□ -0.44
NPM1-204ENST00000517671 SPTLC1O15269 473 aa12.27□□□□□ -0.45
NPM1-204ENST00000517671 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms