RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 FAM174AQ8TBP5 190 aa3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 FAM200AQ8TCP9 573 aa3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 SYMPKQ92797 1274 aaKnown RBP3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 ZBBXA8MT70 800 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 ATP5J2-PTCD1G3V325 749 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 RASA1P20936 1047 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 SCNN1AP37088 669 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 ZC3H6P61129 1189 aaKnown RBP3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 FUT2Q10981 343 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 TJAP1Q5JTD0 557 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 SWT1Q5T5J6 900 aaKnown RBP3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 ANKMY2Q8IV38 441 aa3.89□□□□□ -1.79
SCARNA3-201ENST00000517097 CANXP27824 592 aaKnown RBP3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 TAGLNQ01995 201 aaKnown RBP3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 DPYDQ12882 1025 aa3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 NCOA4Q13772 614 aa3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 SWI5Q1ZZU3 235 aa3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 C1orf216Q8TAB5 229 aa3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 SPATA32Q96LK8 384 aa3.88□□□□□ -1.79
SCARNA3-201ENST00000517097 SMARCA5O60264 1052 aaPredicted RBP3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 LZTS3O60299 673 aaPredicted RBP3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 RNF40O75150 1001 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 RECKO95980 971 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 ATP6V1AP38606 617 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 APLP1P51693 650 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 NAALADL2Q58DX5 795 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 DESI1Q6ICB0 168 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 FBXO33Q7Z6M2 555 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 RETREG3Q86VR2 466 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 UBXN4Q92575 508 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 MTRQ99707 1265 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 CADPSQ9ULU8 1353 aa3.87□□□□□ -1.79
SCARNA3-201ENST00000517097 PPM1GO15355 546 aaPredicted RBP3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 ABL1P00519 1130 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 KCNH2Q12809 1159 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 SLFNL1Q499Z3 407 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 LYPD8Q6UX82 237 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 PHTF2Q8N3S3 785 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 OGFOD1Q8N543 542 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 PLPP7Q8NBV4 271 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 ZNF516Q92618 1163 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 ASB16Q96NS5 453 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 CHMP4AQ9BY43 222 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 CEP126Q9P2H0 1117 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 PPP1R1BQ9UD71 204 aaPredicted RBP3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 EGFL7Q9UHF1 273 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 FKBPLQ9UIM3 349 aa3.86□□□□□ -1.79
SCARNA3-201ENST00000517097 H3BRB1 525 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 PRMT3O60678 531 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 ICMTO60725 284 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 CFHP08603 1231 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 MAPK1P28482 360 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 ZNF211Q13398 564 aaPredicted RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 SF3A1Q15459 793 aaKnown RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 TSNAXIP1Q2TAA8 658 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 TAS1R3Q7RTX0 852 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 RNF135Q8IUD6 432 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 ZNF594Q96JF6 807 aaPredicted RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 TUT1Q9H6E5 874 aaKnown RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 IL21Q9HBE4 155 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 ANO2Q9NQ90 1003 aa3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 CXXC1Q9P0U4 656 aaPredicted RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 ZC3H4Q9UPT8 1303 aaKnown RBP3.85□□□□□ -1.79
SCARNA3-201ENST00000517097 LCE2BO14633 110 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 CLDN10P78369 228 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 EML3Q32P44 896 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 PPP1R18Q6NYC8 613 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 TRAF7Q6Q0C0 670 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 Q6ZNB5 142 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 GLYCTKQ8IVS8 523 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 ZSCAN29Q8IWY8 852 aaPredicted RBP3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 NKX2-3Q8TAU0 364 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 PRIMPOLQ96LW4 560 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 DNAAF2Q9NVR5 837 aaKnown RBP3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 DCTN4Q9UJW0 460 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 CHIC2Q9UKJ5 165 aa3.84□□□□□ -1.79
SCARNA3-201ENST00000517097 ZBTB7BO15156 539 aaPredicted RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 C21orf2O43822 256 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 DKK1O94907 266 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 F12P00748 615 aaPredicted RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 ERCC5P28715 1186 aaPredicted RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 SLC4A3P48751 1232 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 ATP1A2P50993 1020 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 HDGFP51858 240 aaKnown RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 MCCD1P59942 119 aaPredicted RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 COPS2P61201 443 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 COL19A1Q14993 1142 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 ECM1Q16610 540 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 OCLNQ16625 522 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 MAP7D1Q3KQU3 841 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 EAPPQ56P03 285 aaPredicted RBP3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 TRIM50Q86XT4 487 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 LARGE2Q8N3Y3 721 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 ZNF592Q92610 1267 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 PRKD2Q9BZL6 878 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 BCL11AQ9H165 835 aa3.83□□□□□ -1.8
SCARNA3-201ENST00000517097 EIF5BO60841 1220 aaKnown RBP3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 SEC13P55735 322 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 HDLBPQ00341 1268 aaKnown RBP3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 FKBP4Q02790 459 aaKnown RBP eCLIP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms