RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 RIPK4P57078 832 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NUCB2P80303 420 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RABEP1Q15276 862 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 GGT6Q6P531 493 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PLEKHF1Q96S99 279 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SLKQ9H2G2 1235 aaPredicted RBP4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CWC22Q9HCG8 908 aaKnown RBP4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SPINK5Q9NQ38 1064 aaPredicted RBP4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ZBTB40Q9NUA8 1239 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TECPR2O15040 1411 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RIMS2Q9UQ26 1411 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TOPAZ1Q8N9V7 1692 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 AK9Q5TCS8 1911 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CD163L1Q9NR16 1453 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 KIAA0232Q92628 1395 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 FSD2A1L4K1 749 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 K7ELQ4 463 aaPredicted RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 EPB41L2O43491 1005 aaKnown RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TRAK2O60296 914 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 HMMRO75330 724 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MCCP23508 829 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CLCN1P35523 988 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TNNT2P45379 298 aaPredicted RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SLC4A3P48751 1232 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 EXOSC9Q06265 439 aaKnown RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CCDC173Q0VFZ6 552 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NFE2L2Q16236 605 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 INTS3Q68E01 1043 aaKnown RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CLEC17AQ6ZS10 378 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CHD1LQ86WJ1 897 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SSH1Q8WYL5 1049 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ZNF692Q9BU19 519 aaPredicted RBP4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 STAG3Q9UJ98 1225 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 BRPF3Q9ULD4 1205 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PCDHB15Q9Y5E8 787 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SSH2Q76I76 1423 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 DIP2AQ14689 1571 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ABCC4O15439 1325 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PTPRCP08575 1304 aa4.18□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PHF14O94880 888 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RLBP1P12271 317 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PDIA4P13667 645 aaKnown RBP4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RAB3GAP1Q15042 981 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 HS1BP3Q53T59 392 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RPAP2Q8IXW5 612 aaPredicted RBP4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SYAP1Q96A49 352 aaPredicted RBP4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SIRT1Q96EB6 747 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 BCL2L13Q9BXK5 485 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 GRPEL1Q9HAV7 217 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RRP7AQ9Y3A4 280 aaKnown RBP4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TTC21BQ7Z4L5 1316 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PXDNLA1KZ92 1463 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 A2ML1A8K2U0 1454 aa4.17□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 USP54Q70EL1 1684 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 FAM208AQ9UK61 1670 aaKnown RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RGPD1P0DJD0 1748 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 FYB1O15117 783 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RRP9O43818 475 aaKnown RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MBD3O95983 291 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TPM2P07951 284 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MSNP26038 577 aaKnown RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MCM5P33992 734 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TERF1P54274 439 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CACNB1Q02641 598 aaPredicted RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 KLHL40Q2TBA0 621 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MTERF4Q7Z6M4 381 aaKnown RBP4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 OSCARQ8IYS5 282 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TMEM57Q8N5G2 664 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 COG3Q96JB2 828 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PRAM1Q96QH2 718 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MAP7D2Q96T17 732 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CABP2Q9NPB3 220 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TRIM35Q9UPQ4 493 aa4.16□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RTL1A6NKG5 1358 aa4.15□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 DIP2BQ9P265 1576 aa4.15□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 LRRC37A3O60309 1634 aa4.15□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NRXN3Q9Y4C0 1643 aa4.15□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PRKAR2BP31323 418 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 DDIT3P35638 169 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 CSPP1Q1MSJ5 1256 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 TWISTNBQ3B726 338 aaPredicted RBP4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 TMEM132EQ6IEE7 984 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 TSR2Q969E8 191 aaKnown RBP4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 SRCIN1Q9C0H9 1055 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 RTN4Q9NQC3 1192 aaKnown RBP4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 HDAC5Q9UQL6 1122 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 TUBGCP6Q96RT7 1819 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 AOX1Q06278 1338 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 UBR1Q8IWV7 1749 aa4.15□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 ESPNB1AK53 854 aa4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 ZBTB7BO15156 539 aaPredicted RBP4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 SEC24BO95487 1268 aa4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 NCLP19338 710 aaKnown RBP4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 NASPP49321 788 aaPredicted RBP4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 CCT4P50991 539 aaKnown RBP4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 ANAPC15P60006 121 aa4.14□□□□□ -1.75
RNU4ATAC3P-201ENST00000516699 IDI1Q13907 227 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms