RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 LSM11P83369 360 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TRIM26Q12899 539 aaPredicted RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 FAM50AQ14320 339 aaKnown RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NUTM2DQ5VT03 806 aaPredicted RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 POTEBQ6S5H4 581 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SAMD7Q7Z3H4 446 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 RIC3Q7Z5B4 369 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PPARGC1BQ86YN6 1023 aaKnown RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NUTM2AQ8IVF1 878 aaPredicted RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SLF2Q8IX21 1173 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PROCA1Q8NCQ7 364 aaPredicted RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SPIRE2Q8WWL2 714 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SLC4A5Q9BY07 1137 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 MROH1Q8NDA8 1641 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 UNC13BO14795 1591 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CNTLNQ9NXG0 1405 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ZC3H13Q5T200 1668 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TK2O00142 265 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 KDM4AO75164 1064 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CD46P15529 392 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PPP4CP60510 307 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 GRIPAP1Q4V328 841 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 MYSM1Q5VVJ2 828 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ADGRD1Q6QNK2 874 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 LAPTM4BQ86VI4 370 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TSC1Q92574 1164 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 LRCH3Q96II8 777 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ZFRQ96KR1 1074 aaKnown RBP3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 GOPCQ9HD26 462 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TIMELESSQ9UNS1 1208 aa3.28□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ARHGAP31Q2M1Z3 1444 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SETD5Q9C0A6 1442 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ADAMTSL3P82987 1691 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 IQGAP3Q86VI3 1631 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NDUFV2P19404 249 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 GCGRP47871 477 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CLK2P49760 499 aaKnown RBP3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 KMT5BQ4FZB7 885 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SH3D19Q5HYK7 790 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ANKK1Q8NFD2 765 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NECTIN2Q92692 538 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 WNT2BQ93097 391 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ABCC3O15438 1527 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RPRD2Q5VT52 1461 aaKnown RBP3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SIGLEC1Q9BZZ2 1709 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 MROH2AA6NES4 1674 aa3.27□□□□□ -1.89
SCARNA16.3-201ENST00000516595 EFCAB6Q5THR3 1501 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 MOXD2PA6NHM9 499 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 BHMG1C9JSJ3 638 aaPredicted RBP3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SLC10A3P09131 477 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SPNS2Q8IVW8 549 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RRP7BPQ9NSQ0 103 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CHIC2Q9UKJ5 165 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PZPP20742 1482 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 TET3O43151 1660 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NPATQ14207 1427 aa3.26□□□□□ -1.89
SCARNA16.3-201ENST00000516595 KANK1Q14678 1352 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RAB3GAP2Q9H2M9 1393 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SPATA31D1Q6ZQQ2 1576 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 C6orf229H3BNL8 230 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 KIF3BO15066 747 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CFHP08603 1231 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 FDX1P10109 184 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ATP6V1AP38606 617 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 BCAMP50895 628 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 USP46P62068 366 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 FLIIQ13045 1269 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ZMYND15Q9H091 742 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 LIMD1Q9UGP4 676 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 MYT1LQ9UL68 1186 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 HPS5Q9UPZ3 1129 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PCDHB15Q9Y5E8 787 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NOS1P29475 1434 aa3.25□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ERVK-7P63135 1459 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CAMSAP1Q5T5Y3 1602 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 MADDQ8WXG6 1647 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 SPTLC1O15269 473 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RAD21O60216 631 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 AP1G2O75843 785 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ITGAEP38570 1179 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RFC5P40937 340 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PTPN5P54829 565 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 GUCA2AQ02747 115 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 FUT2Q10981 343 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PUS10Q3MIT2 529 aaKnown RBP3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 RSBN1LQ6PCB5 846 aaPredicted RBP3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 KCTD12Q96CX2 325 aaKnown RBP3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PRR14Q9BWN1 585 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ZBTB3Q9H5J0 574 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 TSR3Q9UJK0 312 aaKnown RBP3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 FER1L4A9Z1Z3 1794 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PTPRTO14522 1441 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NEURL4Q96JN8 1562 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 NUP155O75694 1391 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 TRPM2O94759 1503 aa3.24□□□□□ -1.89
SCARNA16.3-201ENST00000516595 ARID4BQ4LE39 1312 aaPredicted RBP3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 CLSPNQ9HAW4 1339 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 WASHC2CQ9Y4E1 1318 aa3.23□□□□□ -1.89
SCARNA16.3-201ENST00000516595 PTPRMP28827 1452 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms