RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
TRIM41-209ENST00000515834 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
TRIM41-209ENST00000515834 ZSCAN25Q6NSZ9 544 aa13.07□□□□□ -0.32
TRIM41-209ENST00000515834 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
TRIM41-209ENST00000515834 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
TRIM41-209ENST00000515834 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
TRIM41-209ENST00000515834 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
TRIM41-209ENST00000515834 STIM1Q13586 685 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 GSE1Q14687 1217 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
TRIM41-209ENST00000515834 AACSQ86V21 672 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
TRIM41-209ENST00000515834 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 STARD3NLO95772 234 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
TRIM41-209ENST00000515834 DESP17661 470 aa13.06□□□□□ -0.32
TRIM41-209ENST00000515834 ZRSR2Q15696 482 aaKnown RBP13.05□□□□□ -0.32
TRIM41-209ENST00000515834 TRIM21P19474 475 aaKnown RBP13.05□□□□□ -0.32
TRIM41-209ENST00000515834 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
TRIM41-209ENST00000515834 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
TRIM41-209ENST00000515834 FIBPO43427 364 aa13.05□□□□□ -0.32
TRIM41-209ENST00000515834 CA8P35219 290 aa13.05□□□□□ -0.32
TRIM41-209ENST00000515834 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
TRIM41-209ENST00000515834 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
TRIM41-209ENST00000515834 SERPINC1P01008 464 aa13.05□□□□□ -0.32
TRIM41-209ENST00000515834 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
TRIM41-209ENST00000515834 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
TRIM41-209ENST00000515834 ERLIN2O94905 339 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
TRIM41-209ENST00000515834 SRCIN1Q9C0H9 1055 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
TRIM41-209ENST00000515834 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 ADAMTS8Q9UP79 889 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
TRIM41-209ENST00000515834 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.329e-7■■■■□ 24.4
TRIM41-209ENST00000515834 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 ME1P48163 572 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 PIP4K2AP48426 406 aaPredicted RBP13.03□□□□□ -0.32
TRIM41-209ENST00000515834 METTL24Q5JXM2 366 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
TRIM41-209ENST00000515834 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 LRRCC1Q9C099 1032 aa13.03□□□□□ -0.32
TRIM41-209ENST00000515834 TNIP1Q15025 636 aa13.02□□□□□ -0.32
TRIM41-209ENST00000515834 DHX37Q8IY37 1157 aaKnown RBP13.02□□□□□ -0.32
TRIM41-209ENST00000515834 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.32
TRIM41-209ENST00000515834 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.32
TRIM41-209ENST00000515834 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.32
TRIM41-209ENST00000515834 LIG1P18858 919 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 JMYQ8N9B5 988 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
TRIM41-209ENST00000515834 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
TRIM41-209ENST00000515834 H0YHG0 523 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 AXDND1Q5T1B0 1012 aaPredicted RBP13.02□□□□□ -0.33
TRIM41-209ENST00000515834 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
TRIM41-209ENST00000515834 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
TRIM41-209ENST00000515834 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
TRIM41-209ENST00000515834 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 PDCP20941 246 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 TAX1BP1Q86VP1 789 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 BCAR3O75815 825 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
TRIM41-209ENST00000515834 CAVIN1Q6NZI2 390 aaKnown RBP13.01□□□□□ -0.33
TRIM41-209ENST00000515834 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 CCDC96Q2M329 555 aa13□□□□□ -0.33
TRIM41-209ENST00000515834 SEC63Q9UGP8 760 aaKnown RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 CENPHQ9H3R5 247 aa13□□□□□ -0.33
TRIM41-209ENST00000515834 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 SRGAP3O43295 1099 aa13□□□□□ -0.33
TRIM41-209ENST00000515834 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
TRIM41-209ENST00000515834 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
TRIM41-209ENST00000515834 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
TRIM41-209ENST00000515834 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
TRIM41-209ENST00000515834 CWC27Q6UX04 472 aaKnown RBP12.99□□□□□ -0.33
TRIM41-209ENST00000515834 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
TRIM41-209ENST00000515834 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIM41-209ENST00000515834 POGZQ7Z3K3 1410 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms