RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 KRT28Q7Z3Y7 464 aa26.33■■□□□ 1.81
TRIO-223ENST00000515710 SPINK5Q9NQ38 1064 aaPredicted RBP26.33■■□□□ 1.81
TRIO-223ENST00000515710 IRX6P78412 446 aaPredicted RBP26.32■■□□□ 1.8
TRIO-223ENST00000515710 HSP90AB2PQ58FF8 381 aa26.32■■□□□ 1.8
TRIO-223ENST00000515710 HMOX1P09601 288 aa26.31■■□□□ 1.8
TRIO-223ENST00000515710 KCNH5Q8NCM2 988 aa26.31■■□□□ 1.8
TRIO-223ENST00000515710 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
TRIO-223ENST00000515710 RRP1P56182 461 aaKnown RBP26.28■■□□□ 1.8
TRIO-223ENST00000515710 RIPK4P57078 832 aa26.28■■□□□ 1.8
TRIO-223ENST00000515710 XIRP1Q702N8 1843 aaKnown RBP26.28■■□□□ 1.8
TRIO-223ENST00000515710 TRIM35Q9UPQ4 493 aa26.27■■□□□ 1.8
TRIO-223ENST00000515710 TRPM3Q9HCF6 1732 aaPredicted RBP26.26■■□□□ 1.8
TRIO-223ENST00000515710 RTL1A6NKG5 1358 aa26.26■■□□□ 1.79
TRIO-223ENST00000515710 NFE2L2Q16236 605 aa26.26■■□□□ 1.79
TRIO-223ENST00000515710 HOXC9P31274 260 aa26.25■■□□□ 1.79
TRIO-223ENST00000515710 XPCQ01831 940 aaPredicted RBP26.25■■□□□ 1.79
TRIO-223ENST00000515710 IL16Q14005 1332 aa26.25■■□□□ 1.79
TRIO-223ENST00000515710 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
TRIO-223ENST00000515710 SULT6B1Q6IMI4 303 aa26.24■■□□□ 1.79
TRIO-223ENST00000515710 PHACTR3Q96KR7 559 aa26.24■■□□□ 1.79
TRIO-223ENST00000515710 MYH16Q9H6N6 1097 aa26.24■■□□□ 1.79
TRIO-223ENST00000515710 NPHP3Q7Z494 1330 aa26.23■■□□□ 1.79
TRIO-223ENST00000515710 RGPD1P0DJD0 1748 aa26.23■■□□□ 1.79
TRIO-223ENST00000515710 NFAT5O94916 1531 aa26.23■■□□□ 1.79
TRIO-223ENST00000515710 SLIT3O75094 1523 aa26.21■■□□□ 1.79
TRIO-223ENST00000515710 PPP4R2Q9NY27 417 aa26.21■■□□□ 1.79
TRIO-223ENST00000515710 USP19O94966 1318 aa26.21■■□□□ 1.79
TRIO-223ENST00000515710 IP6K1Q92551 441 aa26.2■■□□□ 1.79
TRIO-223ENST00000515710 GCP02774 474 aa26.2■■□□□ 1.78
TRIO-223ENST00000515710 LMOD2Q6P5Q4 547 aa26.19■■□□□ 1.78
TRIO-223ENST00000515710 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
TRIO-223ENST00000515710 IGSF1Q8N6C5 1336 aa26.18■■□□□ 1.78
TRIO-223ENST00000515710 AEBP1Q8IUX7 1158 aa26.18■■□□□ 1.78
TRIO-223ENST00000515710 CALD1Q05682 793 aaKnown RBP26.17■■□□□ 1.78
TRIO-223ENST00000515710 EYA1Q99502 592 aa26.17■■□□□ 1.78
TRIO-223ENST00000515710 ALS2Q96Q42 1657 aa26.16■■□□□ 1.78
TRIO-223ENST00000515710 KDRP35968 1356 aa26.16■■□□□ 1.78
TRIO-223ENST00000515710 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.16■■□□□ 1.78
TRIO-223ENST00000515710 PHRF1Q9P1Y6 1649 aaKnown RBP26.16■■□□□ 1.78
TRIO-223ENST00000515710 BRINP3Q76B58 766 aa26.15■■□□□ 1.78
TRIO-223ENST00000515710 SLAIN2Q9P270 581 aa26.15■■□□□ 1.78
TRIO-223ENST00000515710 LTN1O94822 1766 aa26.14■■□□□ 1.78
TRIO-223ENST00000515710 ARHGEF25Q86VW2 580 aa26.14■■□□□ 1.78
TRIO-223ENST00000515710 DDX17Q92841 729 aaKnown RBP26.12■■□□□ 1.77
TRIO-223ENST00000515710 PXDNQ92626 1479 aa26.12■■□□□ 1.77
TRIO-223ENST00000515710 CT47B1P0C2W7 299 aaPredicted RBP26.12■■□□□ 1.77
TRIO-223ENST00000515710 TNS3Q68CZ2 1445 aa26.11■■□□□ 1.77
TRIO-223ENST00000515710 SPATA31A3Q5VYP0 1347 aa26.1■■□□□ 1.77
TRIO-223ENST00000515710 FANCIQ9NVI1 1328 aa26.1■■□□□ 1.77
TRIO-223ENST00000515710 PLIN1O60240 522 aa26.08■■□□□ 1.76
TRIO-223ENST00000515710 LTV1Q96GA3 475 aaPredicted RBP26.08■■□□□ 1.76
TRIO-223ENST00000515710 ZBTB7CA1YPR0 619 aa26.06■■□□□ 1.76
TRIO-223ENST00000515710 MED1Q15648 1581 aaPredicted RBP26.06■■□□□ 1.76
TRIO-223ENST00000515710 GNAI1P63096 354 aa26.06■■□□□ 1.76
TRIO-223ENST00000515710 TSR2Q969E8 191 aaKnown RBP26.06■■□□□ 1.76
TRIO-223ENST00000515710 IFT57Q9NWB7 429 aa26.06■■□□□ 1.76
TRIO-223ENST00000515710 RARSP54136 660 aaKnown RBP26.04■■□□□ 1.76
TRIO-223ENST00000515710 GAS2L2Q8NHY3 880 aa26.04■■□□□ 1.76
TRIO-223ENST00000515710 DLG5Q8TDM6 1919 aa26.04■■□□□ 1.76
TRIO-223ENST00000515710 BCAR3O75815 825 aa26.04■■□□□ 1.76
TRIO-223ENST00000515710 SOS2Q07890 1332 aaPredicted RBP26.04■■□□□ 1.76
TRIO-223ENST00000515710 EXOSC9Q06265 439 aaKnown RBP26.03■■□□□ 1.76
TRIO-223ENST00000515710 ZNF853P0CG23 659 aa26.02■■□□□ 1.76
TRIO-223ENST00000515710 PLEKHG5O94827 1062 aa26.02■■□□□ 1.76
TRIO-223ENST00000515710 MTHFSDQ2M296 383 aaKnown RBP26.02■■□□□ 1.76
TRIO-223ENST00000515710 EXOC6Q8TAG9 804 aa26.02■■□□□ 1.76
TRIO-223ENST00000515710 CFAP44Q96MT7 982 aa26■■□□□ 1.75
TRIO-223ENST00000515710 THUMPD2Q9BTF0 503 aaKnown RBP26■■□□□ 1.75
TRIO-223ENST00000515710 LAS1LQ9Y4W2 734 aaKnown RBP26■■□□□ 1.75
TRIO-223ENST00000515710 HTATSF1O43719 755 aaKnown RBP25.99■■□□□ 1.75
TRIO-223ENST00000515710 ZC3H6P61129 1189 aaKnown RBP25.99■■□□□ 1.75
TRIO-223ENST00000515710 NBPF6Q5VWK0 638 aa25.99■■□□□ 1.75
TRIO-223ENST00000515710 NBPF4Q96M43 638 aa25.99■■□□□ 1.75
TRIO-223ENST00000515710 FAM83GA6ND36 823 aa25.98■■□□□ 1.75
TRIO-223ENST00000515710 ANKRD24Q8TF21 1146 aa25.98■■□□□ 1.75
TRIO-223ENST00000515710 B4GALNT3Q6L9W6 998 aa25.97■■□□□ 1.75
TRIO-223ENST00000515710 RTF1Q92541 710 aaKnown RBP25.97■■□□□ 1.75
TRIO-223ENST00000515710 DCTN1Q14203 1278 aa25.96■■□□□ 1.75
TRIO-223ENST00000515710 CRBNQ96SW2 442 aa25.96■■□□□ 1.75
TRIO-223ENST00000515710 ZNF428Q96B54 188 aa25.96■■□□□ 1.75
TRIO-223ENST00000515710 AXIN2Q9Y2T1 843 aa25.96■■□□□ 1.75
TRIO-223ENST00000515710 NCAPD2Q15021 1401 aa25.95■■□□□ 1.74
TRIO-223ENST00000515710 PDE3AQ14432 1141 aa25.95■■□□□ 1.74
TRIO-223ENST00000515710 C20orf194Q5TEA3 1177 aa25.95■■□□□ 1.74
TRIO-223ENST00000515710 CCDC136Q96JN2 1154 aa25.95■■□□□ 1.74
TRIO-223ENST00000515710 ABCC6O95255 1503 aa25.95■■□□□ 1.74
TRIO-223ENST00000515710 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
TRIO-223ENST00000515710 CABLES1Q8TDN4 633 aa25.94■■□□□ 1.74
TRIO-223ENST00000515710 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
TRIO-223ENST00000515710 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
TRIO-223ENST00000515710 CPDO75976 1380 aa25.94■■□□□ 1.74
TRIO-223ENST00000515710 LTBP4Q8N2S1 1624 aa25.93■■□□□ 1.74
TRIO-223ENST00000515710 CANXP27824 592 aaKnown RBP25.92■■□□□ 1.74
TRIO-223ENST00000515710 MCM10Q7L590 875 aa25.92■■□□□ 1.74
TRIO-223ENST00000515710 LRRC59Q96AG4 307 aaKnown RBP25.92■■□□□ 1.74
TRIO-223ENST00000515710 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
TRIO-223ENST00000515710 GNAT3A8MTJ3 354 aa25.91■■□□□ 1.74
TRIO-223ENST00000515710 ERBB3P21860 1342 aa25.91■■□□□ 1.74
TRIO-223ENST00000515710 CHL1O00533 1208 aa25.9■■□□□ 1.74
TRIO-223ENST00000515710 ALDH1L2Q3SY69 923 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms