RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-234ENST00000515621 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-234ENST00000515621 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
NR1I3-234ENST00000515621 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-234ENST00000515621 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-234ENST00000515621 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
NR1I3-234ENST00000515621 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
NR1I3-234ENST00000515621 FOXO3O43524 673 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 BRINP3Q76B58 766 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
NR1I3-234ENST00000515621 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-234ENST00000515621 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-234ENST00000515621 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-234ENST00000515621 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
NR1I3-234ENST00000515621 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
NR1I3-234ENST00000515621 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
NR1I3-234ENST00000515621 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
NR1I3-234ENST00000515621 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
NR1I3-234ENST00000515621 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-234ENST00000515621 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NR1I3-234ENST00000515621 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-234ENST00000515621 NEFMP07197 916 aa11.97□□□□□ -0.49
NR1I3-234ENST00000515621 DSG3P32926 999 aa11.97□□□□□ -0.49
NR1I3-234ENST00000515621 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
NR1I3-234ENST00000515621 KDRP35968 1356 aa11.96□□□□□ -0.49
NR1I3-234ENST00000515621 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
NR1I3-234ENST00000515621 CPDO75976 1380 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
NR1I3-234ENST00000515621 GCP02774 474 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 AMPHP49418 695 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 IP6K1Q92551 441 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
NR1I3-234ENST00000515621 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-234ENST00000515621 HOXC9P31274 260 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
NR1I3-234ENST00000515621 ARHGEF25Q86VW2 580 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-234ENST00000515621 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
NR1I3-234ENST00000515621 IL16Q14005 1332 aa11.93□□□□□ -0.5
NR1I3-234ENST00000515621 LTN1O94822 1766 aa11.93□□□□□ -0.5
NR1I3-234ENST00000515621 APAF1O14727 1248 aa11.93□□□□□ -0.5
NR1I3-234ENST00000515621 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
NR1I3-234ENST00000515621 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
NR1I3-234ENST00000515621 E9PSI1 815 aa11.92□□□□□ -0.5
NR1I3-234ENST00000515621 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
NR1I3-234ENST00000515621 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NR1I3-234ENST00000515621 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NR1I3-234ENST00000515621 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
NR1I3-234ENST00000515621 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
NR1I3-234ENST00000515621 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NR1I3-234ENST00000515621 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
NR1I3-234ENST00000515621 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-234ENST00000515621 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 FBLN1P23142 703 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
NR1I3-234ENST00000515621 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
NR1I3-234ENST00000515621 TOM1O60784 492 aa11.89□□□□□ -0.51
NR1I3-234ENST00000515621 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-234ENST00000515621 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
NR1I3-234ENST00000515621 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
NR1I3-234ENST00000515621 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
NR1I3-234ENST00000515621 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
NR1I3-234ENST00000515621 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-234ENST00000515621 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
NR1I3-234ENST00000515621 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
NR1I3-234ENST00000515621 COL18A1P39060 1754 aa11.87□□□□□ -0.51
NR1I3-234ENST00000515621 SOX12O15370 315 aa11.86□□□□□ -0.51
NR1I3-234ENST00000515621 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
NR1I3-234ENST00000515621 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
NR1I3-234ENST00000515621 EYA1Q99502 592 aa11.86□□□□□ -0.51
NR1I3-234ENST00000515621 ERBB3P21860 1342 aa11.86□□□□□ -0.51
NR1I3-234ENST00000515621 NEFLP07196 543 aa11.85□□□□□ -0.51
NR1I3-234ENST00000515621 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
NR1I3-234ENST00000515621 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NR1I3-234ENST00000515621 HMOX1P09601 288 aa11.84□□□□□ -0.51
NR1I3-234ENST00000515621 RIPK4P57078 832 aa11.84□□□□□ -0.51
NR1I3-234ENST00000515621 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
NR1I3-234ENST00000515621 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
NR1I3-234ENST00000515621 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-234ENST00000515621 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
NR1I3-234ENST00000515621 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
NR1I3-234ENST00000515621 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms