RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	TMEM94	Q12767	1356 aa		13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	CANX	P27824	592 aa	Known RBP	13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	CCDC27	Q2M243	656 aa		13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	TNN	Q9UQP3	1299 aa		13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	NALCN	Q8IZF0	1738 aa		13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	PANK1	Q8TE04	598 aa		13.6	□□□□□ -0.23
CDK18-222	ENST00000515494	RSPH6A	Q9H0K4	717 aa		13.59	□□□□□ -0.23
CDK18-222	ENST00000515494	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK18-222	ENST00000515494	THUMPD2	Q9BTF0	503 aa	Known RBP	13.59	□□□□□ -0.23
CDK18-222	ENST00000515494	ADGRL3	Q9HAR2	1447 aa		13.59	□□□□□ -0.23
CDK18-222	ENST00000515494	ATF3	P18847	181 aa		13.59	□□□□□ -0.23
CDK18-222	ENST00000515494	IL13	P35225	146 aa		13.58	□□□□□ -0.23
CDK18-222	ENST00000515494	RARS	P54136	660 aa	Known RBP	13.58	□□□□□ -0.23
CDK18-222	ENST00000515494	FCHSD2	O94868	740 aa		13.58	□□□□□ -0.24
CDK18-222	ENST00000515494	AEBP1	Q8IUX7	1158 aa		13.58	□□□□□ -0.24
CDK18-222	ENST00000515494	AMPH	P49418	695 aa		13.58	□□□□□ -0.24
CDK18-222	ENST00000515494	C19orf44	Q9H6X5	657 aa		13.58	□□□□□ -0.24
CDK18-222	ENST00000515494	MON2	Q7Z3U7	1717 aa		13.58	□□□□□ -0.24
CDK18-222	ENST00000515494	LAS1L	Q9Y4W2	734 aa	Known RBP	13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	AKAP12	Q02952	1782 aa		13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	MAP3K19	Q56UN5	1328 aa		13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	EXOSC9	Q06265	439 aa	Known RBP	13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	CLUAP1	Q96AJ1	413 aa		13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	MYH16	Q9H6N6	1097 aa		13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	COG6	Q9Y2V7	657 aa		13.57	□□□□□ -0.24
CDK18-222	ENST00000515494	TOPAZ1	Q8N9V7	1692 aa		13.56	□□□□□ -0.24
CDK18-222	ENST00000515494	LRRC7	Q96NW7	1537 aa		13.56	□□□□□ -0.24
CDK18-222	ENST00000515494	LMTK3	Q96Q04	1460 aa		13.56	□□□□□ -0.24
CDK18-222	ENST00000515494	EIF4A2	Q14240	407 aa	Known RBP	13.56	□□□□□ -0.24
CDK18-222	ENST00000515494	SULT6B1	Q6IMI4	303 aa		13.55	□□□□□ -0.24
CDK18-222	ENST00000515494	NEFM	P07197	916 aa		13.55	□□□□□ -0.24
CDK18-222	ENST00000515494	TTC21A	Q8NDW8	1320 aa		13.55	□□□□□ -0.24
CDK18-222	ENST00000515494	FMN2	Q9NZ56	1722 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	AATK	Q6ZMQ8	1374 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	SSH2	Q76I76	1423 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	ANKAR	Q7Z5J8	1434 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	RLBP1	P12271	317 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	OVOS2	A0A0J9YW53	1432 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	OVOS2	Q6IE36	1432 aa		13.54	□□□□□ -0.24
CDK18-222	ENST00000515494	KRT28	Q7Z3Y7	464 aa		13.53	□□□□□ -0.24
CDK18-222	ENST00000515494	PNN	Q9H307	717 aa	Known RBP	13.53	□□□□□ -0.24
CDK18-222	ENST00000515494	FAM83G	A6ND36	823 aa		13.53	□□□□□ -0.24
CDK18-222	ENST00000515494	DCTN1	Q14203	1278 aa		13.52	□□□□□ -0.24
CDK18-222	ENST00000515494	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK18-222	ENST00000515494	NFE2L2	Q16236	605 aa		13.52	□□□□□ -0.25
CDK18-222	ENST00000515494	USHBP1	Q8N6Y0	703 aa		13.52	□□□□□ -0.25
CDK18-222	ENST00000515494	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK18-222	ENST00000515494	STRCP1	A6NGW2	1772 aa		13.52	□□□□□ -0.25
CDK18-222	ENST00000515494	CABLES1	Q8TDN4	633 aa		13.51	□□□□□ -0.25
CDK18-222	ENST00000515494	GLIPR1L2	Q4G1C9	344 aa		13.51	□□□□□ -0.25
CDK18-222	ENST00000515494	ELL2	O00472	640 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK18-222	ENST00000515494	SMC4	Q9NTJ3	1288 aa		13.51	□□□□□ -0.25
CDK18-222	ENST00000515494	ANP32A	P39687	249 aa	Known RBP	13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	NRK	Q7Z2Y5	1582 aa		13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	ZC3H6	P61129	1189 aa	Known RBP	13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	PDE3A	Q14432	1141 aa		13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	SSH1	Q8WYL5	1049 aa		13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	KDM2B	Q8NHM5	1336 aa		13.5	□□□□□ -0.25
CDK18-222	ENST00000515494	NCBP3	Q53F19	620 aa	Known RBP	13.49	□□□□□ -0.25
CDK18-222	ENST00000515494	C1orf167	Q5SNV9	1468 aa		13.49	□□□□□ -0.25
CDK18-222	ENST00000515494	PIK3C2A	O00443	1686 aa		13.49	□□□□□ -0.25
CDK18-222	ENST00000515494	TCERG1	O14776	1098 aa	Known RBP	13.49	□□□□□ -0.25
CDK18-222	ENST00000515494	IGHD	P01880	384 aa		13.48	□□□□□ -0.25
CDK18-222	ENST00000515494	VSIG10	Q8N0Z9	540 aa		13.48	□□□□□ -0.25
CDK18-222	ENST00000515494	MSH6	P52701	1360 aa		13.48	□□□□□ -0.25
CDK18-222	ENST00000515494	USP31	Q70CQ4	1352 aa		13.48	□□□□□ -0.25
CDK18-222	ENST00000515494	CADPS2	Q86UW7	1296 aa		13.48	□□□□□ -0.25
CDK18-222	ENST00000515494	HOXC9	P31274	260 aa		13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	EYA1	Q99502	592 aa		13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	STRC	Q7RTU9	1775 aa		13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	RGS3	P49796	1198 aa		13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	TSPYL6	Q8N831	410 aa		13.47	□□□□□ -0.25
CDK18-222	ENST00000515494	IL16	Q14005	1332 aa		13.46	□□□□□ -0.25
CDK18-222	ENST00000515494	GC	P02774	474 aa		13.46	□□□□□ -0.25
CDK18-222	ENST00000515494	PEAK1	Q9H792	1746 aa		13.46	□□□□□ -0.25
CDK18-222	ENST00000515494	NWD1	Q149M9	1564 aa		13.46	□□□□□ -0.25
CDK18-222	ENST00000515494	BRPF3	Q9ULD4	1205 aa		13.46	□□□□□ -0.25
CDK18-222	ENST00000515494	LRRC59	Q96AG4	307 aa	Known RBP	13.46	□□□□□ -0.26
CDK18-222	ENST00000515494	FTSJ3	Q8IY81	847 aa	Known RBP	13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	NOB1	Q9ULX3	412 aa	Known RBP	13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	FLT4	P35916	1363 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	ZKSCAN2	Q63HK3	967 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	MCM10	Q7L590	875 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	MBIP	Q9NS73	344 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	TRIM27	P14373	513 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	SBNO1	A3KN83	1393 aa		13.45	□□□□□ -0.26
CDK18-222	ENST00000515494	MST1R	Q04912	1400 aa		13.44	□□□□□ -0.26
CDK18-222	ENST00000515494	PDE4A	P27815	886 aa		13.44	□□□□□ -0.26
CDK18-222	ENST00000515494	PCDHB15	Q9Y5E8	787 aa		13.44	□□□□□ -0.26
CDK18-222	ENST00000515494	NPM2	Q86SE8	214 aa	Known RBP	13.44	□□□□□ -0.26
CDK18-222	ENST00000515494	CHRNA2	Q15822	529 aa		13.44	□□□□□ -0.26
CDK18-222	ENST00000515494	DZIP1L	Q8IYY4	767 aa	Known RBP	13.43	□□□□□ -0.26
CDK18-222	ENST00000515494	BRINP3	Q76B58	766 aa		13.43	□□□□□ -0.26
CDK18-222	ENST00000515494	SLAIN2	Q9P270	581 aa		13.43	□□□□□ -0.26
CDK18-222	ENST00000515494	KRT24	Q2M2I5	525 aa		13.42	□□□□□ -0.26
CDK18-222	ENST00000515494	MIS18A	Q9NYP9	233 aa		13.42	□□□□□ -0.26
CDK18-222	ENST00000515494	ZMYND15	Q9H091	742 aa		13.42	□□□□□ -0.26
CDK18-222	ENST00000515494	CT47B1	P0C2W7	299 aa	Predicted RBP	13.42	□□□□□ -0.26
CDK18-222	ENST00000515494	GNAI1	P63096	354 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms